Gene name: YIR042C
Reference locus (S288C): YIR042C
Gene biotype: protein_coding
Description: Uncharacterized protein yir042c; Putative protein of unknown function; YIR042C is a non-essential gene
Top 10 interactors (score): YIL001W (0.76); YPS6 (0.713); COS12 (0.694); ISW1 (0.657); RXT3 (0.656); ITC1 (0.651); ZWF1 (0.639); HPA2 (0.636); PGI1 (0.634); ILV3 (0.626); IES3 (0.616); RKI1 (0.592); FRT1 (0.587); HPA3 (0.578); RXT2 (0.567); NPL6 (0.564); YDR248C (0.562); TPI1 (0.542); MDE1 (0.54); ISW2 (0.529)
Homologues (species, bitscore): AT2G32030 (Arabidopsis thaliana, 50.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | MBVO01000063.1:12379-13089:- | gene-YIR042C_AKU4011 | rna-NM_001179564.1_AKU4011 | cds-NP_012308.1_AKU4011 | 85.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | MBVY01000337.1:2435-3145:+ | gene-YIR042C_Bruggeman | rna-NM_001179564.1_Bruggeman | cds-NP_012308.1_Bruggeman | 85.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | MBVS01000092.1:12400-13110:- | gene-YIR042C_CBS1585 | rna-NM_001179564.1_CBS1585 | cds-NP_012308.1_CBS1585 | 85.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | MBVQ01000058.1:12060-12770:- | gene-YIR042C_CBS6412 | rna-NM_001179564.1_CBS6412 | cds-NP_012308.1_CBS6412 | 85.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | MBVP01000082.1:4276-4986:+ | gene-YIR042C_CBS6413 | rna-NM_001179564.1_CBS6413 | cds-NP_012308.1_CBS6413 | 85.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:426970-427680:- | gene-YIR042C_CENPK1137D | rna-NM_001179564.1_CENPK1137D | cds-NP_012308.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | MBWB01000037.1:12036-12746:- | gene-YIR042C_EthanolRed | rna-NM_001179564.1_EthanolRed | cds-NP_012308.1_EthanolRed | 85.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | MBWD01000114.1:12036-12746:- | gene-YIR042C_FaliES1 | rna-NM_001179564.1_FaliES1 | cds-NP_012308.1_FaliES1 | 85.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | MBVX01000004.1:17949-18659:- | gene-YIR042C_MUCL30387 | rna-NM_001179564.1_MUCL30387 | cds-NP_012308.1_MUCL30387 | 85.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | MBVW01000049.1:12237-12947:- | gene-YIR042C_MUCL30388 | rna-NM_001179564.1_MUCL30388 | cds-NP_012308.1_MUCL30388 | 85.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | MBVN01000084.1:12511-13221:- | gene-YIR042C_MUCL39482 | rna-NM_001179564.1_MUCL39482 | cds-NP_012308.1_MUCL39482 | 85.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:441204-441914:- | gene-YIR042C_MUCL42920 | rna-NM_001179564.1_MUCL42920 | cds-NP_012308.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:435273-435983:- | gene-YIR042C_NCIM3186 | rna-NM_001179564.1_NCIM3186 | cds-NP_012308.1_NCIM3186 | 97.1 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | MBVM01000121.1:2609-3319:+ | gene-YIR042C_NCYC1407 | rna-NM_001179564.1_NCYC1407 | cds-NP_012308.1_NCYC1407 | 85.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:435273-435983:- | gene-YIR042C_S288C | rna-NM_001179564.1_S288C | cds-NP_012308.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | MBWA01000091.1:12036-12746:- | gene-YIR042C_ThermosaccDry | rna-NM_001179564.1_ThermosaccDry | cds-NP_012308.1_ThermosaccDry | 85.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000020.1:42392-43102:- | gene-YIR042C_ZTW1 | rna-NM_001179564.1_ZTW1 | cds-NP_012308.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:431413-432123:- | gene-YIR042C_Sparadoxus | rna-NM_001179564.1_Sparadoxus | cds-NP_012308.1_Sparadoxus | 88.9 | 99.8 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |