Gene name: YIR020C
Reference locus (S288C): YIR020C
Gene biotype: protein_coding
Description: Uncharacterized protein YIR020C; Protein of unknown function; mRNA identified as translated by ribosome profiling data; SWAT-GFP fusion protein localizes to the endoplasmic reticulum
Top 10 interactors (score): YDR187C (0.901); YCR022C (0.891); YGR176W (0.841); MAK32 (0.817); YCR051W (0.779); ECM30 (0.766); YCR007C (0.76); IMG1 (0.744); RRT12 (0.715); MRPL4 (0.713); ADP1 (0.712); ARE1 (0.71); RSC6 (0.7); DIF1 (0.697); GBP2 (0.693); PET18 (0.676); CAR2 (0.67); SEC39 (0.651); BUD23 (0.572); PYK2 (0.565)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:392437-392739:- | gene-YIR020C_AKU4011 | rna-NM_001270752.1_AKU4011 | cds-NP_001257681.1_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000072.1:34115-34417:+ | gene-YIR020C_BG1 | rna-NM_001270752.1_BG1 | cds-NP_001257681.1_BG1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:398316-398618:- | gene-YIR020C_Bruggeman | rna-NM_001270752.1_Bruggeman | cds-NP_001257681.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:383617-383919:- | gene-YIR020C_CAT1 | rna-NM_001270752.1_CAT1 | cds-NP_001257681.1_CAT1 | 98.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:393418-393720:- | gene-YIR020C_CBS1585 | rna-NM_001270752.1_CBS1585 | cds-NP_001257681.1_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:385430-385732:- | gene-YIR020C_CBS436 | rna-NM_001270752.1_CBS436 | cds-NP_001257681.1_CBS436 | 98.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005327.1:91923-92225:- | gene-YIR020C_CBS6412 | rna-NM_001270752.1_CBS6412 | cds-NP_001257681.1_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:384518-384820:- | gene-YIR020C_CBS6413 | rna-NM_001270752.1_CBS6413 | cds-NP_001257681.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:385916-386218:- | gene-YIR020C_CENPK1137D | rna-NM_001270752.1_CENPK1137D | cds-NP_001257681.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:375395-375697:- | gene-YIR020C_EthanolRed | rna-NM_001270752.1_EthanolRed | cds-NP_001257681.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:395223-395525:- | gene-YIR020C_FaliES1 | rna-NM_001270752.1_FaliES1 | cds-NP_001257681.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000039.1:38626-38928:+ | gene-YIR020C_JAY291 | rna-NM_001270752.1_JAY291 | cds-NP_001257681.1_JAY291 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:398834-399109:- | gene-YIR020C_MUCL30387 | rna-NM_001270752.1_MUCL30387 | cds-NP_001257681.1_MUCL30387 | 85.8 | 91.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:392341-392643:- | gene-YIR020C_MUCL30388 | rna-NM_001270752.1_MUCL30388 | cds-NP_001257681.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:393564-393866:- | gene-YIR020C_MUCL39482 | rna-NM_001270752.1_MUCL39482 | cds-NP_001257681.1_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:398846-399148:- | gene-YIR020C_MUCL42920 | rna-NM_001270752.1_MUCL42920 | cds-NP_001257681.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:394255-394557:- | gene-YIR020C_NCIM3186 | rna-NM_001270752.1_NCIM3186 | cds-NP_001257681.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:397328-397630:- | gene-YIR020C_NCYC1407 | rna-NM_001270752.1_NCYC1407 | cds-NP_001257681.1_NCYC1407 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:388204-388506:- | gene-YIR020C_PE2H3 | rna-NM_001270752.1_PE2H3 | cds-NP_001257681.1_PE2H3 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:382910-383212:- | gene-YIR020C_PE2H4 | rna-NM_001270752.1_PE2H4 | cds-NP_001257681.1_PE2H4 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:394255-394557:- | gene-YIR020C_S288C | rna-NM_001270752.1_S288C | cds-NP_001257681.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000097.1:34290-34592:+ | gene-YIR020C_SA1 | rna-NM_001270752.1_SA1 | cds-NP_001257681.1_SA1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:391826-392128:- | gene-YIR020C_ThermosaccDry | rna-NM_001270752.1_ThermosaccDry | cds-NP_001257681.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:389437-389739:- | gene-YIR020C_VR1 | rna-NM_001270752.1_VR1 | cds-NP_001257681.1_VR1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000020.1:1255-1557:- | gene-YIR020C_ZTW1 | rna-NM_001270752.1_ZTW1 | cds-NP_001257681.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:389735-390036:- | gene-YIR020C_Sparadoxus | rna-NM_001270752.1_Sparadoxus | cds-NP_001257681.1_Sparadoxus | 86.8 | 99.3 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |