YIR018C-A (YIR018C-A)

Gene profile

Gene name: YIR018C-A
Reference locus (S288C): YIR018C-A
Gene biotype: protein_coding

Description: Uncharacterized protein YIR018C-A; Putative protein of unknown function; identified by expression profiling and mass spectrometry

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005303.1:384885-385004:- gene-YIR018C-A_AKU4011 rna-NM_001184655.1_AKU4011 cds-NP_878099.1_AKU4011 82.6 86.9 Mismatch 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000072.1:41540-41663:+ gene-YIR018C-A_BG1 rna-NM_001184655.1_BG1 cds-NP_878099.1_BG1 89.8 89.8 Unannotated 1 1 0 False False False True False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005511.1:389202-389339:- gene-YIR018C-A_Bruggeman rna-NM_001184655.1_Bruggeman cds-NP_878099.1_Bruggeman 97.8 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005527.1:375942-376087:- gene-YIR018C-A_CAT1 rna-NM_001184655.1_CAT1 cds-NP_878099.1_CAT1 94.5 100.0 Mismatch 1 1 0 False False False True False
CBS1585 GCA_001738375.1 Sake Asia CM005367.1:384912-385054:- gene-YIR018C-A_CBS1585 rna-NM_001184655.1_CBS1585 cds-NP_878099.1_CBS1585 94.4 100.0 Mismatch 1 1 0 False False False True False
CBS436 GCA_001738355.1 Sake Asia CM005351.1:377507-377645:- gene-YIR018C-A_CBS436 rna-NM_001184655.1_CBS436 cds-NP_878099.1_CBS436 98.5 100.0 Unannotated 1 1 0 False False False True False
CBS6412 GCA_001738345.1 Sake Asia CM005335.1:380403-380547:- gene-YIR018C-A_CBS6412 rna-NM_001184655.1_CBS6412 cds-NP_878099.1_CBS6412 86.8 100.0 Unannotated 1 1 0 False False False True False
CBS6413 GCA_001738265.1 Sake Asia CM005319.1:376993-377133:- gene-YIR018C-A_CBS6413 rna-NM_001184655.1_CBS6413 cds-NP_878099.1_CBS6413 95.7 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001530.1:377619-377751:- gene-YIR018C-A_CENPK1137D rna-NM_001184655.1_CENPK1137D cds-NP_878099.1_CENPK1137D 96.3 96.3 Unannotated 1 1 0 False False False True False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005479.1:367967-368103:- gene-YIR018C-A_EthanolRed rna-NM_001184655.1_EthanolRed cds-NP_878099.1_EthanolRed 97.1 99.2 Mismatch 1 1 0 False False False True False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005543.1:386717-386856:- gene-YIR018C-A_FaliES1 rna-NM_001184655.1_FaliES1 cds-NP_878099.1_FaliES1 96.4 100.0 Mismatch 1 1 0 False False False True False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000009.1:5212-5348:+ gene-YIR018C-A_JAY291 rna-NM_001184655.1_JAY291 cds-NP_878099.1_JAY291 98.5 99.2 Mismatch 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe CM005415.1:386695-386832:- gene-YIR018C-A_MUCL30387 rna-NM_001184655.1_MUCL30387 cds-NP_878099.1_MUCL30387 97.8 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005447.1:383499-383636:- gene-YIR018C-A_MUCL30388 rna-NM_001184655.1_MUCL30388 cds-NP_878099.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005287.1:385554-385685:- gene-YIR018C-A_MUCL39482 rna-NM_001184655.1_MUCL39482 cds-NP_878099.1_MUCL39482 91.3 95.6 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005431.1:389116-389253:- gene-YIR018C-A_MUCL42920 rna-NM_001184655.1_MUCL42920 cds-NP_878099.1_MUCL42920 97.8 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011818.1:385564-385701:- gene-YIR018C-A_NCIM3186 rna-NM_001184655.1_NCIM3186 cds-NP_878099.1_NCIM3186 97.8 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005271.1:389776-389910:- gene-YIR018C-A_NCYC1407 rna-NM_001184655.1_NCYC1407 cds-NP_878099.1_NCYC1407 91.3 97.8 Mismatch 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994148.1:379524-379660:- gene-YIR018C-A_PE2H3 rna-NM_001184655.1_PE2H3 cds-NP_878099.1_PE2H3 98.5 99.2 Mismatch 1 1 0 False False False True False
PE2H4 GCA_905220315.1 Bioethanol South America LR999880.1:374230-374366:- gene-YIR018C-A_PE2H4 rna-NM_001184655.1_PE2H4 cds-NP_878099.1_PE2H4 98.5 99.2 Mismatch 1 1 0 False False False True False
S288C GCF_000146045.2 Laboratory Not applicable NC_001141.2:385564-385701:- gene-YIR018C-A_S288C rna-NM_001184655.1_S288C cds-NP_878099.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000066.1:60418-60554:- gene-YIR018C-A_SA1 rna-NM_001184655.1_SA1 cds-NP_878099.1_SA1 96.3 99.2 Mismatch 1 1 0 False False False True False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005495.1:384322-384462:- gene-YIR018C-A_ThermosaccDry rna-NM_001184655.1_ThermosaccDry cds-NP_878099.1_ThermosaccDry 95.7 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005463.1:380405-380542:- gene-YIR018C-A_VR1 rna-NM_001184655.1_VR1 cds-NP_878099.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000019.1:358321-358460:- gene-YIR018C-A_ZTW1 rna-NM_001184655.1_ZTW1 cds-NP_878099.1_ZTW1 96.4 100.0 Mismatch 1 1 0 False False False True False

Additional files