Gene name: YIM1
Reference locus (S288C): YMR152W
Gene biotype: protein_coding
Description: Protein of unknown function; null mutant displays sensitivity to DNA damaging agents; may have a role in lipid metabolism, based on localization to lipid droplets; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): MSC1 (0.786); SUT1 (0.744); ETR1 (0.709); TGL1 (0.708); ESBP6 (0.695); GTT1 (0.657); ATF2 (0.656); CAB5 (0.648); YDL124W (0.645); TPS1 (0.623); ANR2 (0.619); YPR147C (0.611); YNR064C (0.581); SAY1 (0.58); LPL1 (0.574); CIS1 (0.574); INO80 (0.573); MNT3 (0.571); YMR102C (0.567); GPX2 (0.565)
Homologues (species, bitscore): RTN4IP1 (Homo sapiens, 89.0); Rtn4ip1 (Mus musculus, 88.2); rtn4ip1 (Danio rerio, 100.1); rtn4ip1 (Xenopus tropicalis, 81.6); CG17221 (Drosophila melanogaster, 73.6); rad-8 (Caenorhabditis elegans, 55.8); AOR (Arabidopsis thaliana, 76.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:602600-603697:+ | gene-YMR152W_AKU4011 | rna-NM_001182654.1_AKU4011 | cds-NP_013872.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000068.1:68856-69953:- | gene-YMR152W_BG1 | rna-NM_001182654.1_BG1 | cds-NP_013872.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:545768-546865:+ | gene-YMR152W_Bruggeman | rna-NM_001182654.1_Bruggeman | cds-NP_013872.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:547977-549074:+ | gene-YMR152W_CAT1 | rna-NM_001182654.1_CAT1 | cds-NP_013872.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:535524-536621:+ | gene-YMR152W_CBS1585 | rna-NM_001182654.1_CBS1585 | cds-NP_013872.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:539397-540494:+ | gene-YMR152W_CBS436 | rna-NM_001182654.1_CBS436 | cds-NP_013872.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:648142-649239:+ | gene-YMR152W_CBS6412 | rna-NM_001182654.1_CBS6412 | cds-NP_013872.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:534075-535172:+ | gene-YMR152W_CBS6413 | rna-NM_001182654.1_CBS6413 | cds-NP_013872.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:557606-558703:+ | gene-YMR152W_CENPK1137D | rna-NM_001182654.1_CENPK1137D | cds-NP_013872.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:533690-534787:+ | gene-YMR152W_EthanolRed | rna-NM_001182654.1_EthanolRed | cds-NP_013872.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:540689-541786:+ | gene-YMR152W_FaliES1 | rna-NM_001182654.1_FaliES1 | cds-NP_013872.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000115.1:12525-13622:+ | gene-YMR152W_JAY291 | rna-NM_001182654.1_JAY291 | cds-NP_013872.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:540493-541590:+ | gene-YMR152W_MUCL30387 | rna-NM_001182654.1_MUCL30387 | cds-NP_013872.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:546017-547114:+ | gene-YMR152W_MUCL30388 | rna-NM_001182654.1_MUCL30388 | cds-NP_013872.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:536211-537308:+ | gene-YMR152W_MUCL39482 | rna-NM_001182654.1_MUCL39482 | cds-NP_013872.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:542502-543599:+ | gene-YMR152W_MUCL42920 | rna-NM_001182654.1_MUCL42920 | cds-NP_013872.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:563050-564147:+ | gene-YMR152W_NCIM3186 | rna-NM_001182654.1_NCIM3186 | cds-NP_013872.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:535914-537011:+ | gene-YMR152W_NCYC1407 | rna-NM_001182654.1_NCYC1407 | cds-NP_013872.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:546279-547376:+ | gene-YMR152W_PE2H3 | rna-NM_001182654.1_PE2H3 | cds-NP_013872.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:546737-547834:+ | gene-YMR152W_PE2H4 | rna-NM_001182654.1_PE2H4 | cds-NP_013872.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:563096-564193:+ | gene-YMR152W_S288C | rna-NM_001182654.1_S288C | cds-NP_013872.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000048.1:7083-8180:- | gene-YMR152W_SA1 | rna-NM_001182654.1_SA1 | cds-NP_013872.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:536337-537434:+ | gene-YMR152W_ThermosaccDry | rna-NM_001182654.1_ThermosaccDry | cds-NP_013872.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:548792-549889:+ | gene-YMR152W_VR1 | rna-NM_001182654.1_VR1 | cds-NP_013872.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:511231-512328:+ | gene-YMR152W_ZTW1 | rna-NM_001182654.1_ZTW1 | cds-NP_013872.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:547634-548731:+ | gene-YMR152W_Sparadoxus | rna-NM_001182654.1_Sparadoxus | cds-NP_013872.1_Sparadoxus | 90.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |