YIL108W (YIL108W)


Gene profile

Gene name: YIL108W
Reference locus (S288C): YIL108W
Gene biotype: protein_coding

Description: Putative zinc metalloproteinase YIL108W; Putative metalloendopeptidase; forms cytoplasmic foci upon DNA replication stress; Belongs to the peptidase M10B family

Top 10 interactors (score): YER034W (0.941); YCR1W (0.898); SLM5 (0.848); BOP3 (0.844); PAC2 (0.748); CDC10 (0.692); CHO1 (0.691); RTT101 (0.653); ECM33 (0.62); SAM1 (0.619); ULA1 (0.612); CDC9 (0.568); MSH6 (0.499); SWP1 (0.495); RTC4 (0.495); ACE2 (0.465); PIN3 (0.446)

Homologues (species, bitscore): CG6294 (Drosophila melanogaster, 66.2)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005303.1:162358-164448:+ gene-YIL108W_AKU4011 rna-NM_001179456.1_AKU4011 cds-NP_012158.1_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000164.1:25287-27377:+ gene-YIL108W_BG1 rna-NM_001179456.1_BG1 cds-NP_012158.1_BG1 99.6 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005511.1:166997-169087:+ gene-YIL108W_Bruggeman rna-NM_001179456.1_Bruggeman cds-NP_012158.1_Bruggeman 99.8 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005527.1:159038-161128:+ gene-YIL108W_CAT1 rna-NM_001179456.1_CAT1 cds-NP_012158.1_CAT1 99.8 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005367.1:162617-164707:+ gene-YIL108W_CBS1585 rna-NM_001179456.1_CBS1585 cds-NP_012158.1_CBS1585 99.5 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005351.1:153537-155627:+ gene-YIL108W_CBS436 rna-NM_001179456.1_CBS436 cds-NP_012158.1_CBS436 99.9 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005335.1:159994-162084:+ gene-YIL108W_CBS6412 rna-NM_001179456.1_CBS6412 cds-NP_012158.1_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005319.1:153647-155737:+ gene-YIL108W_CBS6413 rna-NM_001179456.1_CBS6413 cds-NP_012158.1_CBS6413 99.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001530.1:152502-154592:+ gene-YIL108W_CENPK1137D rna-NM_001179456.1_CENPK1137D cds-NP_012158.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005479.1:147584-149674:+ gene-YIL108W_EthanolRed rna-NM_001179456.1_EthanolRed cds-NP_012158.1_EthanolRed 99.6 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005543.1:163583-165673:+ gene-YIL108W_FaliES1 rna-NM_001179456.1_FaliES1 cds-NP_012158.1_FaliES1 99.6 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000025.1:62877-64967:- gene-YIL108W_JAY291 rna-NM_001179456.1_JAY291 cds-NP_012158.1_JAY291 99.9 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005415.1:163833-165923:+ gene-YIL108W_MUCL30387 rna-NM_001179456.1_MUCL30387 cds-NP_012158.1_MUCL30387 99.7 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005447.1:162573-164663:+ gene-YIL108W_MUCL30388 rna-NM_001179456.1_MUCL30388 cds-NP_012158.1_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005287.1:163461-165551:+ gene-YIL108W_MUCL39482 rna-NM_001179456.1_MUCL39482 cds-NP_012158.1_MUCL39482 99.5 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005431.1:166719-168809:+ gene-YIL108W_MUCL42920 rna-NM_001179456.1_MUCL42920 cds-NP_012158.1_MUCL42920 99.6 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011818.1:160887-162977:+ gene-YIL108W_NCIM3186 rna-NM_001179456.1_NCIM3186 cds-NP_012158.1_NCIM3186 99.4 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005271.1:167505-169595:+ gene-YIL108W_NCYC1407 rna-NM_001179456.1_NCYC1407 cds-NP_012158.1_NCYC1407 99.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994148.1:161996-164086:+ gene-YIL108W_PE2H3 rna-NM_001179456.1_PE2H3 cds-NP_012158.1_PE2H3 99.9 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999880.1:156037-158127:+ gene-YIL108W_PE2H4 rna-NM_001179456.1_PE2H4 cds-NP_012158.1_PE2H4 99.6 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001141.2:160887-162977:+ gene-YIL108W_S288C rna-NM_001179456.1_S288C cds-NP_012158.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000058.1:20389-22479:- gene-YIL108W_SA1 rna-NM_001179456.1_SA1 cds-NP_012158.1_SA1 99.6 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005495.1:162240-164330:+ gene-YIL108W_ThermosaccDry rna-NM_001179456.1_ThermosaccDry cds-NP_012158.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005463.1:159146-161236:+ gene-YIL108W_VR1 rna-NM_001179456.1_VR1 cds-NP_012158.1_VR1 99.7 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000019.1:137179-139269:+ gene-YIL108W_ZTW1 rna-NM_001179456.1_ZTW1 cds-NP_012158.1_ZTW1 99.6 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047495.1:154979-157069:+ gene-YIL108W_Sparadoxus rna-NM_001179456.1_Sparadoxus cds-NP_012158.1_Sparadoxus 90.4 100.0 Verified 1 1 1 False True False False False

Additional files