YIH1 (YCR059C)


Gene profile

Gene name: YIH1
Reference locus (S288C): YCR059C
Gene biotype: protein_coding

Description: Protein IMPACT homolog; Negative regulator of eIF2 kinase Gcn2p; competes with Gcn2p for binding to Gcn1p; may contribute to regulation of translation in response to starvation via regulation of Gcn2p; binds to monomeric actin and to ribosomes and polyribosomes; ortholog of mammalian IMPACT; Belongs to the IMPACT family

Top 10 interactors (score): GIR2 (0.922); GCN2 (0.915); GCN1 (0.903); YLR419W (0.892); YJR096W (0.75); MRH4 (0.71); KRS1 (0.703); ATG14 (0.69); MSS116 (0.69); PDI1 (0.657); HAS1 (0.65); VMA1 (0.598); MSD1 (0.591); YEF3 (0.56); MSK1 (0.528); ACT1 (0.487); GAL10 (0.485); HTZ1 (0.482); TEF2 (0.473); CAR1 (0.408)

Homologues (species, bitscore): IMPACT (Homo sapiens, 120.2); Impact (Mus musculus, 126.7); impact (Danio rerio, 70.5); impact (Xenopus tropicalis, 114.8); impt-1 (Caenorhabditis elegans, 118.6)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005297.1:217913-218689:- gene-YCR059C_AKU4011 rna-NM_001178770.1_AKU4011 cds-NP_009985.1_AKU4011 99.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000067.1:72115-72891:- gene-YCR059C_BG1 rna-NM_001178770.1_BG1 cds-NP_009985.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005505.1:213872-214648:- gene-YCR059C_Bruggeman rna-NM_001178770.1_Bruggeman cds-NP_009985.1_Bruggeman 99.4 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005521.1:225245-226021:- gene-YCR059C_CAT1 rna-NM_001178770.1_CAT1 cds-NP_009985.1_CAT1 99.8 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005361.1:212691-213467:- gene-YCR059C_CBS1585 rna-NM_001178770.1_CBS1585 cds-NP_009985.1_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005345.1:224587-225363:- gene-YCR059C_CBS436 rna-NM_001178770.1_CBS436 cds-NP_009985.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005329.1:204431-205207:- gene-YCR059C_CBS6412 rna-NM_001178770.1_CBS6412 cds-NP_009985.1_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005313.1:218808-219584:- gene-YCR059C_CBS6413 rna-NM_001178770.1_CBS6413 cds-NP_009985.1_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001524.1:222637-223413:- gene-YCR059C_CENPK1137D rna-NM_001178770.1_CENPK1137D cds-NP_009985.1_CENPK1137D 99.3 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005473.1:213876-214652:- gene-YCR059C_EthanolRed rna-NM_001178770.1_EthanolRed cds-NP_009985.1_EthanolRed 99.4 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005537.1:219041-219817:- gene-YCR059C_FaliES1 rna-NM_001178770.1_FaliES1 cds-NP_009985.1_FaliES1 99.4 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000014.1:3365-4141:+ gene-YCR059C_JAY291 rna-NM_001178770.1_JAY291 cds-NP_009985.1_JAY291 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005409.1:210856-211632:- gene-YCR059C_MUCL30387 rna-NM_001178770.1_MUCL30387 cds-NP_009985.1_MUCL30387 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005441.1:210230-211006:- gene-YCR059C_MUCL30388 rna-NM_001178770.1_MUCL30388 cds-NP_009985.1_MUCL30388 99.4 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005281.1:219264-220040:- gene-YCR059C_MUCL39482 rna-NM_001178770.1_MUCL39482 cds-NP_009985.1_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005425.1:215706-216482:- gene-YCR059C_MUCL42920 rna-NM_001178770.1_MUCL42920 cds-NP_009985.1_MUCL42920 99.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011812.1:223086-223862:- gene-YCR059C_NCIM3186 rna-NM_001178770.1_NCIM3186 cds-NP_009985.1_NCIM3186 99.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005265.1:220123-220899:- gene-YCR059C_NCYC1407 rna-NM_001178770.1_NCYC1407 cds-NP_009985.1_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994142.1:228800-229576:- gene-YCR059C_PE2H3 rna-NM_001178770.1_PE2H3 cds-NP_009985.1_PE2H3 99.8 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999874.1:223325-224101:- gene-YCR059C_PE2H4 rna-NM_001178770.1_PE2H4 cds-NP_009985.1_PE2H4 99.6 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001135.5:223454-224230:- gene-YCR059C_S288C rna-NM_001178770.1_S288C cds-NP_009985.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000044.1:23340-24116:- gene-YCR059C_SA1 rna-NM_001178770.1_SA1 cds-NP_009985.1_SA1 99.4 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005489.1:219024-219800:- gene-YCR059C_ThermosaccDry rna-NM_001178770.1_ThermosaccDry cds-NP_009985.1_ThermosaccDry 99.4 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005457.1:230298-231074:- gene-YCR059C_VR1 rna-NM_001178770.1_VR1 cds-NP_009985.1_VR1 99.6 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000004.1:216845-217621:- gene-YCR059C_ZTW1 rna-NM_001178770.1_ZTW1 cds-NP_009985.1_ZTW1 99.4 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047489.1:250989-251761:- gene-YCR059C_Sparadoxus rna-NM_001178770.1_Sparadoxus cds-NP_009985.1_Sparadoxus 90.9 99.4 Verified 1 1 0 False False False True False

Additional files