YIG1 (YPL201C)


Gene profile

Gene name: YIG1
Reference locus (S288C): YPL201C
Gene biotype: protein_coding

Description: Protein that interacts with glycerol 3-phosphatase; plays a role in anaerobic glycerol production; localizes to the nucleus and cytosol

Top 10 interactors (score): GPP2 (0.864); YMR027W (0.816); GPP1 (0.813); RGI2 (0.775); AIM33 (0.731); YNL144C (0.616); AIM41 (0.611); VMA10 (0.6); ICY1 (0.571); ISF1 (0.568); YKL162C (0.567); NNR1 (0.566); QRI7 (0.564); THI73 (0.563); YJL193W (0.55); YNL208W (0.526); SFC1 (0.509); APC5 (0.499); EGO4 (0.499); ADY2 (0.496)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:147620-149005:- gene-YPL201C_AKU4011 rna-NM_001184015.1_AKU4011 cds-NP_015123.1_AKU4011 99.2 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:353409-354794:- gene-YPL201C_BG1 rna-NM_001184015.1_BG1 cds-NP_015123.1_BG1 99.8 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:173107-174492:- gene-YPL201C_Bruggeman rna-NM_001184015.1_Bruggeman cds-NP_015123.1_Bruggeman 99.7 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:169711-171096:- gene-YPL201C_CAT1 rna-NM_001184015.1_CAT1 cds-NP_015123.1_CAT1 99.8 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:151807-153192:- gene-YPL201C_CBS1585 rna-NM_001184015.1_CBS1585 cds-NP_015123.1_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:166251-167636:- gene-YPL201C_CBS436 rna-NM_001184015.1_CBS436 cds-NP_015123.1_CBS436 99.9 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:156609-157994:- gene-YPL201C_CBS6412 rna-NM_001184015.1_CBS6412 cds-NP_015123.1_CBS6412 99.2 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:147983-149368:- gene-YPL201C_CBS6413 rna-NM_001184015.1_CBS6413 cds-NP_015123.1_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:169717-171102:- gene-YPL201C_CENPK1137D rna-NM_001184015.1_CENPK1137D cds-NP_015123.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:146738-148123:- gene-YPL201C_EthanolRed rna-NM_001184015.1_EthanolRed cds-NP_015123.1_EthanolRed 99.4 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:153944-155329:- gene-YPL201C_FaliES1 rna-NM_001184015.1_FaliES1 cds-NP_015123.1_FaliES1 99.4 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000069.1:2973-4358:+ gene-YPL201C_JAY291 rna-NM_001184015.1_JAY291 cds-NP_015123.1_JAY291 99.9 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:164819-166204:- gene-YPL201C_MUCL30387 rna-NM_001184015.1_MUCL30387 cds-NP_015123.1_MUCL30387 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:162987-164372:- gene-YPL201C_MUCL30388 rna-NM_001184015.1_MUCL30388 cds-NP_015123.1_MUCL30388 99.4 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:144937-146322:- gene-YPL201C_MUCL39482 rna-NM_001184015.1_MUCL39482 cds-NP_015123.1_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:163841-165226:- gene-YPL201C_MUCL42920 rna-NM_001184015.1_MUCL42920 cds-NP_015123.1_MUCL42920 99.8 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:169753-171138:- gene-YPL201C_NCIM3186 rna-NM_001184015.1_NCIM3186 cds-NP_015123.1_NCIM3186 99.1 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:151385-152770:- gene-YPL201C_NCYC1407 rna-NM_001184015.1_NCYC1407 cds-NP_015123.1_NCYC1407 99.2 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:159121-160506:- gene-YPL201C_PE2H3 rna-NM_001184015.1_PE2H3 cds-NP_015123.1_PE2H3 99.9 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:158764-160149:- gene-YPL201C_PE2H4 rna-NM_001184015.1_PE2H4 cds-NP_015123.1_PE2H4 99.9 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:169770-171155:- gene-YPL201C_S288C rna-NM_001184015.1_S288C cds-NP_015123.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000095.1:3030-4415:+ gene-YPL201C_SA1 rna-NM_001184015.1_SA1 cds-NP_015123.1_SA1 99.8 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:153725-155110:- gene-YPL201C_ThermosaccDry rna-NM_001184015.1_ThermosaccDry cds-NP_015123.1_ThermosaccDry 99.4 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:168651-170036:- gene-YPL201C_VR1 rna-NM_001184015.1_VR1 cds-NP_015123.1_VR1 99.9 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:153244-154629:- gene-YPL201C_ZTW1 rna-NM_001184015.1_ZTW1 cds-NP_015123.1_ZTW1 99.4 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:154783-156177:- gene-YPL201C_Sparadoxus rna-NM_001184015.1_Sparadoxus cds-NP_015123.1_Sparadoxus 85.4 99.9 Verified 1 1 1 False True False False False

Additional files