Gene name: YHR214C-C
Reference locus (S288C): YHR214C-C
Gene biotype: protein_coding
Description: Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag
Top 10 interactors (score): Unknown
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:496801-498123:- | gene-YHR214C-C_NCIM3186 | rna-NM_001184437.3_NCIM3186 | cds-NP_036195.3_NCIM3186 | 90.5 | 92.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:715665-716987:+ | gene-YHR214C-C_PE2H3 | rna-NM_001184437.3_PE2H3 | cds-NP_036195.3_PE2H3 | 91.7 | 92.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:87659-88981:- | gene-YHR214C-C_PE2H4 | rna-NM_001184437.3_PE2H4 | cds-NP_036195.3_PE2H4 | 91.8 | 92.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:547910-549346:- | gene-YHR214C-C_S288C | rna-NM_001184437.3_S288C | cds-NP_036195.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |