Gene name: YHR213W
Reference locus (S288C): YHR213W
Gene biotype: protein_coding
Description: Putative uncharacterized protein YAR062W; Pseudogenic fragment with similarity to flocculins; YHR213W has a paralog, YAR062W, that arose from a segmental duplication; Belongs to the flocculin family
Top 10 interactors (score): YAL065C (0.927); YHR212W-A (0.927); YAL064W-B (0.782); YAR070C (0.744); YFL067W (0.738); YFL066C (0.722); YHR218W (0.703); EMW1 (0.699); YHL045W (0.693); YHR213W-A (0.693); YFL065C (0.674); YHR217C (0.671); YHR219W (0.667); YAR064W (0.642); YMR317W (0.618); YHL050C (0.584); HLR1 (0.574); YHL049C (0.572); ISF1 (0.57); HXT8 (0.567)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:512800-513386:+ | gene-YHR213W_AKU4011 | rna-NM_001179344.1_AKU4011 | cds-NP_012083.1_AKU4011 | 85.6 | 97.6 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000194.1:1-282:- | gene-YHR213W_BG1 | rna-NM_001179344.1_BG1 | cds-NP_012083.1_BG1 | 47.2 | 47.2 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:521037-521626:+ | gene-YHR213W_Bruggeman | rna-NM_001179344.1_Bruggeman | cds-NP_012083.1_Bruggeman | 86.7 | 96.6 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:533604-534200:+ | gene-YHR213W_CAT1 | rna-NM_001179344.1_CAT1 | cds-NP_012083.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005359.1:25108-25694:- | gene-YHR213W_CBS1585 | rna-NM_001179344.1_CBS1585 | cds-NP_012083.1_CBS1585 | 77.8 | 96.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:211430-211959:+ | gene-YHR213W_CBS436 | rna-NM_001179344.1_CBS436 | cds-NP_012083.1_CBS436 | 82.6 | 87.6 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:512336-512922:+ | gene-YHR213W_CBS6412 | rna-NM_001179344.1_CBS6412 | cds-NP_012083.1_CBS6412 | 85.6 | 97.6 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:532213-532809:+ | gene-YHR213W_CENPK1137D | rna-NM_001179344.1_CENPK1137D | cds-NP_012083.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000012.1:10387-10786:- | gene-YHR213W_JAY291 | rna-NM_001179344.1_JAY291 | cds-NP_012083.1_JAY291 | 67.0 | 67.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:536564-536917:+ | gene-YHR213W_MUCL30387 | rna-NM_001179344.1_MUCL30387 | cds-NP_012083.1_MUCL30387 | 56.4 | 59.2 | Verified | 1 | 1 | 0 | False | False | False | False | True |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:539967-540563:+ | gene-YHR213W_MUCL42920 | rna-NM_001179344.1_MUCL42920 | cds-NP_012083.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:539033-539629:+ | gene-YHR213W_NCIM3186 | rna-NM_001179344.1_NCIM3186 | cds-NP_012083.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:514637-515223:+ | gene-YHR213W_NCYC1407 | rna-NM_001179344.1_NCYC1407 | cds-NP_012083.1_NCYC1407 | 85.6 | 97.6 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:527209-527805:+ | gene-YHR213W_PE2H3 | rna-NM_001179344.1_PE2H3 | cds-NP_012083.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:534636-535232:+ | gene-YHR213W_PE2H4 | rna-NM_001179344.1_PE2H4 | cds-NP_012083.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:218549-219145:+ | gene-YHR213W_1_S288C | Unknown | Unknown | 100.0 | 100.0 | Verified | 2 | 2 | 1 | Unknown | Unknown | Unknown | Unknown | Unknown |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:539151-539747:+ | gene-YHR213W_S288C | rna-NM_001179344.1_S288C | cds-NP_012083.1_S288C | 100.0 | 100.0 | Verified | 2 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000118.1:10952-11528:+ | gene-YHR213W_SA1 | rna-NM_001179344.1_SA1 | cds-NP_012083.1_SA1 | 96.6 | 96.6 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | MBVZ01000184.1:12030-12626:+ | gene-YHR213W_VR1 | rna-NM_001179344.1_VR1 | cds-NP_012083.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:505204-505790:+ | gene-YHR213W_ZTW1 | rna-NM_001179344.1_ZTW1 | cds-NP_012083.1_ZTW1 | 85.6 | 97.6 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047487.1:17369-17965:- | gene-YHR213W_Sparadoxus | rna-NM_001179344.1_Sparadoxus | cds-NP_012083.1_Sparadoxus | 75.0 | 97.4 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |