YHR213W-A (YHR213W-A)


Gene profile

Gene name: YHR213W-A
Reference locus (S288C): YHR213W-A
Gene biotype: protein_coding

Description: Uncharacterized protein YHR213W-A; Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching

Top 10 interactors (score): YHR214C-E (0.811); YHR214C-D (0.811); YAL064W-B (0.779); YHR213W-B (0.777); YPL278C (0.766); YHR214W-A (0.758); YAR066W (0.75); YPL277C (0.748); YMR317W (0.746); YAR064W (0.745); ISF1 (0.712); PRM7 (0.697); YAR068W (0.693); YHR213W (0.693); MCH2 (0.677); ATP8 (0.572); TIR2 (0.572); NCA3 (0.569); SAM4 (0.525); YMR320W (0.523)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005295.1:196952-197186:+ gene-YHR213W-A_AKU4011 rna-NM_001184599.3_AKU4011 cds-NP_878092.3_AKU4011 98.7 100.0 Unannotated 1 1 0 False False False True False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000141.1:2987-3220:- gene-YHR213W-A_BG1 rna-NM_001184599.3_BG1 cds-NP_878092.3_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005510.1:522428-522661:+ gene-YHR213W-A_Bruggeman rna-NM_001184599.3_Bruggeman cds-NP_878092.3_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005526.1:541814-542047:+ gene-YHR213W-A_CAT1 rna-NM_001184599.3_CAT1 cds-NP_878092.3_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005359.1:207823-208057:+ gene-YHR213W-A_CBS1585 rna-NM_001184599.3_CBS1585 cds-NP_878092.3_CBS1585 98.7 100.0 Unannotated 1 1 0 False False False True False
CBS436 GCA_001738355.1 Sake Asia CM005350.1:525843-526076:+ gene-YHR213W-A_CBS436 rna-NM_001184599.3_CBS436 cds-NP_878092.3_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005327.1:242236-242470:+ gene-YHR213W-A_CBS6412 rna-NM_001184599.3_CBS6412 cds-NP_878092.3_CBS6412 98.7 100.0 Unannotated 1 1 0 False False False True False
CBS6413 GCA_001738265.1 Sake Asia CM005311.1:204180-204414:+ gene-YHR213W-A_CBS6413 rna-NM_001184599.3_CBS6413 cds-NP_878092.3_CBS6413 98.7 100.0 Unannotated 1 1 0 False False False True False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001529.1:533621-533854:+ gene-YHR213W-A_CENPK1137D rna-NM_001184599.3_CENPK1137D cds-NP_878092.3_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005471.1:193881-194115:+ gene-YHR213W-A_EthanolRed rna-NM_001184599.3_EthanolRed cds-NP_878092.3_EthanolRed 98.7 100.0 Mismatch 1 1 0 False False False True False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005535.1:212386-212620:+ gene-YHR213W-A_FaliES1 rna-NM_001184599.3_FaliES1 cds-NP_878092.3_FaliES1 98.7 100.0 Mismatch 1 1 0 False False False True False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000012.1:9352-9585:- gene-YHR213W-A_JAY291 rna-NM_001184599.3_JAY291 cds-NP_878092.3_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005414.1:537958-538191:+ gene-YHR213W-A_MUCL30387 rna-NM_001184599.3_MUCL30387 cds-NP_878092.3_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005446.1:537949-538182:+ gene-YHR213W-A_MUCL30388 rna-NM_001184599.3_MUCL30388 cds-NP_878092.3_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005279.1:203839-204073:+ gene-YHR213W-A_MUCL39482 rna-NM_001184599.3_MUCL39482 cds-NP_878092.3_MUCL39482 98.7 100.0 Unannotated 1 1 0 False False False True False
MUCL42920 GCA_001738485.1 Bread Europe CM005430.1:541365-541598:+ gene-YHR213W-A_MUCL42920 rna-NM_001184599.3_MUCL42920 cds-NP_878092.3_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011810.1:219824-220057:+ gene-YHR213W-A_1_NCIM3186 Unknown Unknown 100.0 100.0 Verified 2 2 1 Unknown Unknown Unknown Unknown Unknown
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011817.1:540431-540664:+ gene-YHR213W-A_NCIM3186 rna-NM_001184599.3_NCIM3186 cds-NP_878092.3_NCIM3186 100.0 100.0 Verified 2 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005263.1:190406-190640:+ gene-YHR213W-A_NCYC1407 rna-NM_001184599.3_NCYC1407 cds-NP_878092.3_NCYC1407 98.7 100.0 Unannotated 1 1 0 False False False True False
PE2H3 GCA_905220325.1 Bioethanol South America HG994147.1:528607-528840:+ gene-YHR213W-A_PE2H3 rna-NM_001184599.3_PE2H3 cds-NP_878092.3_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999879.1:536034-536267:+ gene-YHR213W-A_PE2H4 rna-NM_001184599.3_PE2H4 cds-NP_878092.3_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001133.9:219947-220180:+ gene-YHR213W-A_1_S288C Unknown Unknown 100.0 100.0 Verified 2 2 1 Unknown Unknown Unknown Unknown Unknown
S288C GCF_000146045.2 Laboratory Not applicable NC_001140.6:540549-540782:+ gene-YHR213W-A_S288C rna-NM_001184599.3_S288C cds-NP_878092.3_S288C 100.0 100.0 Verified 2 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000004.1:306954-307187:+ gene-YHR213W-A_SA1 rna-NM_001184599.3_SA1 cds-NP_878092.3_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005487.1:204565-204799:+ gene-YHR213W-A_ThermosaccDry rna-NM_001184599.3_ThermosaccDry cds-NP_878092.3_ThermosaccDry 98.7 100.0 Mismatch 1 1 0 False False False True False
VR1 GCA_001738595.1 Bioethanol South America CM005462.1:541301-541534:+ gene-YHR213W-A_VR1 rna-NM_001184599.3_VR1 cds-NP_878092.3_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000002.1:193484-193716:+ gene-YHR213W-A_ZTW1 rna-NM_001184599.3_ZTW1 cds-NP_878092.3_ZTW1 98.7 99.5 Verified 1 1 0 False False False True False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047487.1:217825-218058:+ gene-YHR213W-A_Sparadoxus rna-NM_001184599.3_Sparadoxus cds-NP_878092.3_Sparadoxus 85.6 98.7 Mismatch 1 1 0 False False False False True

Additional files