YHR175W-A (YHR175W-A)

Gene profile

Gene name: YHR175W-A
Reference locus (S288C): YHR175W-A
Gene biotype: protein_coding

Description: Uncharacterized membrane protein YHR175W-A; Putative protein of unknown function; identified by fungal homology and RT-PCR

Top 10 interactors (score): TEL2 (0.434)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005302.1:440655-440805:+ gene-YHR175W-A_AKU4011 rna-NM_001184554.1_AKU4011 cds-NP_878090.1_AKU4011 97.3 100.0 Unannotated 1 1 0 False False False True False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000141.1:76939-77088:- gene-YHR175W-A_BG1 rna-NM_001184554.1_BG1 cds-NP_878090.1_BG1 100.0 100.0 Mismatch 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005510.1:447896-448045:+ gene-YHR175W-A_Bruggeman rna-NM_001184554.1_Bruggeman cds-NP_878090.1_Bruggeman 100.0 100.0 Mismatch 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005526.1:443297-443446:+ gene-YHR175W-A_CAT1 rna-NM_001184554.1_CAT1 cds-NP_878090.1_CAT1 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005366.1:440109-440259:+ gene-YHR175W-A_CBS1585 rna-NM_001184554.1_CBS1585 cds-NP_878090.1_CBS1585 97.3 100.0 Unannotated 1 1 0 False False False True False
CBS436 GCA_001738355.1 Sake Asia CM005350.1:437549-437698:+ gene-YHR175W-A_CBS436 rna-NM_001184554.1_CBS436 cds-NP_878090.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005334.1:440192-440343:+ gene-YHR175W-A_CBS6412 rna-NM_001184554.1_CBS6412 cds-NP_878090.1_CBS6412 97.3 100.0 Mismatch 1 1 0 False False False True False
CBS6413 GCA_001738265.1 Sake Asia CM005318.1:440994-441144:+ gene-YHR175W-A_CBS6413 rna-NM_001184554.1_CBS6413 cds-NP_878090.1_CBS6413 98.0 100.0 Unannotated 1 1 0 False False False True False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001529.1:446739-446888:+ gene-YHR175W-A_CENPK1137D rna-NM_001184554.1_CENPK1137D cds-NP_878090.1_CENPK1137D 100.0 100.0 Mismatch 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005478.1:499204-499354:+ gene-YHR175W-A_EthanolRed rna-NM_001184554.1_EthanolRed cds-NP_878090.1_EthanolRed 97.3 100.0 Unannotated 1 1 0 False False False True False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005542.1:441647-441798:+ gene-YHR175W-A_FaliES1 rna-NM_001184554.1_FaliES1 cds-NP_878090.1_FaliES1 96.7 100.0 Mismatch 1 1 0 False False False True False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000376.1:12993-13142:- gene-YHR175W-A_JAY291 rna-NM_001184554.1_JAY291 cds-NP_878090.1_JAY291 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005414.1:448969-449118:+ gene-YHR175W-A_MUCL30387 rna-NM_001184554.1_MUCL30387 cds-NP_878090.1_MUCL30387 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005446.1:448408-448557:+ gene-YHR175W-A_MUCL30388 rna-NM_001184554.1_MUCL30388 cds-NP_878090.1_MUCL30388 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005286.1:440020-440170:+ gene-YHR175W-A_MUCL39482 rna-NM_001184554.1_MUCL39482 cds-NP_878090.1_MUCL39482 97.3 100.0 Unannotated 1 1 0 False False False True False
MUCL42920 GCA_001738485.1 Bread Europe CM005430.1:446626-446776:+ gene-YHR175W-A_MUCL42920 rna-NM_001184554.1_MUCL42920 cds-NP_878090.1_MUCL42920 99.3 100.0 Unannotated 1 1 0 False False False True False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011817.1:453440-453589:+ gene-YHR175W-A_NCIM3186 rna-NM_001184554.1_NCIM3186 cds-NP_878090.1_NCIM3186 100.0 100.0 Mismatch 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005270.1:442479-442629:+ gene-YHR175W-A_NCYC1407 rna-NM_001184554.1_NCYC1407 cds-NP_878090.1_NCYC1407 97.3 100.0 Unannotated 1 1 0 False False False True False
PE2H3 GCA_905220325.1 Bioethanol South America HG994147.1:441618-441767:+ gene-YHR175W-A_PE2H3 rna-NM_001184554.1_PE2H3 cds-NP_878090.1_PE2H3 100.0 100.0 Mismatch 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999879.1:449045-449194:+ gene-YHR175W-A_PE2H4 rna-NM_001184554.1_PE2H4 cds-NP_878090.1_PE2H4 100.0 100.0 Mismatch 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001140.6:453558-453707:+ gene-YHR175W-A_S288C rna-NM_001184554.1_S288C cds-NP_878090.1_S288C 100.0 100.0 Mismatch 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000079.1:1376-1525:+ gene-YHR175W-A_SA1 rna-NM_001184554.1_SA1 cds-NP_878090.1_SA1 100.0 100.0 Mismatch 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005494.1:442730-442881:+ gene-YHR175W-A_ThermosaccDry rna-NM_001184554.1_ThermosaccDry cds-NP_878090.1_ThermosaccDry 96.7 100.0 Mismatch 1 1 0 False False False True False
VR1 GCA_001738595.1 Bioethanol South America CM005462.1:450544-450693:+ gene-YHR175W-A_VR1 rna-NM_001184554.1_VR1 cds-NP_878090.1_VR1 100.0 100.0 Mismatch 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000017.1:432971-433122:+ gene-YHR175W-A_ZTW1 rna-NM_001184554.1_ZTW1 cds-NP_878090.1_ZTW1 97.3 100.0 Mismatch 1 1 0 False False False True False

Additional files