YHR078W (YHR078W)


Gene profile

Gene name: YHR078W
Reference locus (S288C): YHR078W
Gene biotype: protein_coding

Description: Uncharacterized protein YHR078W; High osmolarity-regulated gene of unknown function

Top 10 interactors (score): RER1 (0.756); GET4 (0.675); ERD1 (0.64); YIP1 (0.595); VRG4 (0.57); HVG1 (0.57); RPN11 (0.56); SFT2 (0.542); YIP5 (0.502); YER039C-A (0.489); ISW1 (0.466); HOC1 (0.426); VPH1 (0.412); STV1 (0.412); GPA2 (0.409)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005302.1:242773-244431:+ gene-YHR078W_AKU4011 rna-NM_001179208.1_AKU4011 cds-NP_011945.1_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000053.1:163121-164779:+ gene-YHR078W_BG1 rna-NM_001179208.1_BG1 cds-NP_011945.1_BG1 99.8 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005510.1:250601-252259:+ gene-YHR078W_Bruggeman rna-NM_001179208.1_Bruggeman cds-NP_011945.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005526.1:245743-247401:+ gene-YHR078W_CAT1 rna-NM_001179208.1_CAT1 cds-NP_011945.1_CAT1 99.8 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005366.1:241814-243472:+ gene-YHR078W_CBS1585 rna-NM_001179208.1_CBS1585 cds-NP_011945.1_CBS1585 99.5 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005350.1:239674-241332:+ gene-YHR078W_CBS436 rna-NM_001179208.1_CBS436 cds-NP_011945.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005334.1:245160-246818:+ gene-YHR078W_CBS6412 rna-NM_001179208.1_CBS6412 cds-NP_011945.1_CBS6412 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005318.1:242854-244512:+ gene-YHR078W_CBS6413 rna-NM_001179208.1_CBS6413 cds-NP_011945.1_CBS6413 99.5 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001529.1:249530-251188:+ gene-YHR078W_CENPK1137D rna-NM_001179208.1_CENPK1137D cds-NP_011945.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005478.1:302380-304038:+ gene-YHR078W_EthanolRed rna-NM_001179208.1_EthanolRed cds-NP_011945.1_EthanolRed 99.6 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005542.1:243184-244842:+ gene-YHR078W_FaliES1 rna-NM_001179208.1_FaliES1 cds-NP_011945.1_FaliES1 99.6 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000394.1:25909-27567:+ gene-YHR078W_JAY291 rna-NM_001179208.1_JAY291 cds-NP_011945.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005414.1:250116-251774:+ gene-YHR078W_MUCL30387 rna-NM_001179208.1_MUCL30387 cds-NP_011945.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005446.1:249985-251643:+ gene-YHR078W_MUCL30388 rna-NM_001179208.1_MUCL30388 cds-NP_011945.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005286.1:242138-243796:+ gene-YHR078W_MUCL39482 rna-NM_001179208.1_MUCL39482 cds-NP_011945.1_MUCL39482 99.5 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005430.1:248884-250542:+ gene-YHR078W_MUCL42920 rna-NM_001179208.1_MUCL42920 cds-NP_011945.1_MUCL42920 99.8 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011817.1:256242-257900:+ gene-YHR078W_NCIM3186 rna-NM_001179208.1_NCIM3186 cds-NP_011945.1_NCIM3186 99.2 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005270.1:244602-246260:+ gene-YHR078W_NCYC1407 rna-NM_001179208.1_NCYC1407 cds-NP_011945.1_NCYC1407 99.5 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994147.1:244273-245931:+ gene-YHR078W_PE2H3 rna-NM_001179208.1_PE2H3 cds-NP_011945.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999879.1:251720-253378:+ gene-YHR078W_PE2H4 rna-NM_001179208.1_PE2H4 cds-NP_011945.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001140.6:256360-258018:+ gene-YHR078W_S288C rna-NM_001179208.1_S288C cds-NP_011945.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000014.1:100970-102628:- gene-YHR078W_SA1 rna-NM_001179208.1_SA1 cds-NP_011945.1_SA1 99.8 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005494.1:244275-245933:+ gene-YHR078W_ThermosaccDry rna-NM_001179208.1_ThermosaccDry cds-NP_011945.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005462.1:252148-253806:+ gene-YHR078W_VR1 rna-NM_001179208.1_VR1 cds-NP_011945.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000017.1:235825-237484:+ gene-YHR078W_ZTW1 rna-NM_001179208.1_ZTW1 cds-NP_011945.1_ZTW1 99.6 100.0 Unannotated 1 1 0 False False False True False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047494.1:241528-243189:+ gene-YHR078W_Sparadoxus rna-NM_001179208.1_Sparadoxus cds-NP_011945.1_Sparadoxus 90.6 99.9 Verified 1 1 1 False True False False False

Additional files