YHR054C-B (YHR054C-B)

Gene profile

Gene name: YHR054C-B
Reference locus (S288C): YHR054C-B
Gene biotype: protein_coding

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005302.1:200781-200954:- gene-YHR054C-B_AKU4011 rna-NM_001395032.1_AKU4011 cds-NP_001381961.1_AKU4011 98.8 100.0 Mismatch 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000053.1:121921-122094:- gene-YHR054C-B_BG1 rna-NM_001395032.1_BG1 cds-NP_001381961.1_BG1 98.8 100.0 Mismatch 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005510.1:208533-208706:- gene-YHR054C-B_Bruggeman rna-NM_001395032.1_Bruggeman cds-NP_001381961.1_Bruggeman 98.8 100.0 Mismatch 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005526.1:203327-203500:- gene-YHR054C-B_CAT1 rna-NM_001395032.1_CAT1 cds-NP_001381961.1_CAT1 98.8 100.0 Mismatch 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005366.1:199887-200060:- gene-YHR054C-B_CBS1585 rna-NM_001395032.1_CBS1585 cds-NP_001381961.1_CBS1585 98.8 100.0 Mismatch 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005350.1:195644-195817:- gene-YHR054C-B_CBS436 rna-NM_001395032.1_CBS436 cds-NP_001381961.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:200119-200292:- gene-YHR054C-B_CBS6412 rna-NM_001395032.1_CBS6412 cds-NP_001381961.1_CBS6412 98.8 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005318.1:200951-201124:- gene-YHR054C-B_CBS6413 rna-NM_001395032.1_CBS6413 cds-NP_001381961.1_CBS6413 98.8 100.0 Mismatch 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005478.1:200278-200451:- gene-YHR054C-B_EthanolRed rna-NM_001395032.1_EthanolRed cds-NP_001381961.1_EthanolRed 98.8 100.0 Mismatch 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005542.1:201255-201428:- gene-YHR054C-B_FaliES1 rna-NM_001395032.1_FaliES1 cds-NP_001381961.1_FaliES1 98.8 100.0 Mismatch 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000330.1:463-636:- gene-YHR054C-B_JAY291 rna-NM_001395032.1_JAY291 cds-NP_001381961.1_JAY291 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005414.1:207992-208165:- gene-YHR054C-B_MUCL30387 rna-NM_001395032.1_MUCL30387 cds-NP_001381961.1_MUCL30387 98.8 100.0 Mismatch 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005446.1:208168-208341:- gene-YHR054C-B_MUCL30388 rna-NM_001395032.1_MUCL30388 cds-NP_001381961.1_MUCL30388 98.8 100.0 Mismatch 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005286.1:200172-200345:- gene-YHR054C-B_MUCL39482 rna-NM_001395032.1_MUCL39482 cds-NP_001381961.1_MUCL39482 98.8 100.0 Mismatch 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005430.1:207076-207249:- gene-YHR054C-B_MUCL42920 rna-NM_001395032.1_MUCL42920 cds-NP_001381961.1_MUCL42920 98.8 100.0 Mismatch 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011817.1:214399-214572:- gene-YHR054C-B_NCIM3186 rna-NM_001395032.1_NCIM3186 cds-NP_001381961.1_NCIM3186 100.0 100.0 Mismatch 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005270.1:200436-200609:- gene-YHR054C-B_NCYC1407 rna-NM_001395032.1_NCYC1407 cds-NP_001381961.1_NCYC1407 98.8 100.0 Mismatch 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994147.1:202374-202547:- gene-YHR054C-B_PE2H3 rna-NM_001395032.1_PE2H3 cds-NP_001381961.1_PE2H3 100.0 100.0 Mismatch 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999879.1:209821-209994:- gene-YHR054C-B_PE2H4 rna-NM_001395032.1_PE2H4 cds-NP_001381961.1_PE2H4 100.0 100.0 Mismatch 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001140.6:214517-214690:- gene-YHR054C-B_S288C rna-NM_001395032.1_S288C cds-NP_001381961.1_S288C 100.0 100.0 Mismatch 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000014.1:144742-144915:+ gene-YHR054C-B_SA1 rna-NM_001395032.1_SA1 cds-NP_001381961.1_SA1 98.8 100.0 Mismatch 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005494.1:202346-202519:- gene-YHR054C-B_ThermosaccDry rna-NM_001395032.1_ThermosaccDry cds-NP_001381961.1_ThermosaccDry 98.8 100.0 Mismatch 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005462.1:209127-209300:- gene-YHR054C-B_VR1 rna-NM_001395032.1_VR1 cds-NP_001381961.1_VR1 98.8 100.0 Mismatch 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000017.1:193899-194072:- gene-YHR054C-B_ZTW1 rna-NM_001395032.1_ZTW1 cds-NP_001381961.1_ZTW1 98.8 100.0 Mismatch 1 1 1 False True False False False

Additional files