YHR007C-A (YHR007C-A)

Gene profile

Gene name: YHR007C-A
Reference locus (S288C): YHR007C-A
Gene biotype: protein_coding

Description: Uncharacterized protein YHR007C-A; Putative protein of unknown function; identified by expression profiling and mass spectrometry; SWAT-GFP fusion protein localizes to the nucleus

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005302.1:110838-111055:- gene-YHR007C-A_AKU4011 rna-NM_001184651.1_AKU4011 cds-NP_878086.1_AKU4011 98.6 100.0 Mismatch 1 1 0 False False False True False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000053.1:30551-30766:- gene-YHR007C-A_BG1 rna-NM_001184651.1_BG1 cds-NP_878086.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005510.1:117674-117891:- gene-YHR007C-A_Bruggeman rna-NM_001184651.1_Bruggeman cds-NP_878086.1_Bruggeman 98.1 100.0 Mismatch 1 1 0 False False False True False
CAT1 GCA_001738705.1 Bioethanol South America CM005526.1:111908-112125:- gene-YHR007C-A_CAT1 rna-NM_001184651.1_CAT1 cds-NP_878086.1_CAT1 98.1 100.0 Mismatch 1 1 0 False False False True False
CBS1585 GCA_001738375.1 Sake Asia CM005366.1:111424-111641:- gene-YHR007C-A_CBS1585 rna-NM_001184651.1_CBS1585 cds-NP_878086.1_CBS1585 98.6 100.0 Mismatch 1 1 0 False False False True False
CBS436 GCA_001738355.1 Sake Asia CM005350.1:104243-104458:- gene-YHR007C-A_CBS436 rna-NM_001184651.1_CBS436 cds-NP_878086.1_CBS436 99.0 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005334.1:111021-111238:- gene-YHR007C-A_CBS6412 rna-NM_001184651.1_CBS6412 cds-NP_878086.1_CBS6412 98.1 100.0 Mismatch 1 1 0 False False False True False
CBS6413 GCA_001738265.1 Sake Asia CM005318.1:110754-110971:- gene-YHR007C-A_CBS6413 rna-NM_001184651.1_CBS6413 cds-NP_878086.1_CBS6413 98.1 100.0 Mismatch 1 1 0 False False False True False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001529.1:115357-115572:- gene-YHR007C-A_CENPK1137D rna-NM_001184651.1_CENPK1137D cds-NP_878086.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005478.1:110637-110854:- gene-YHR007C-A_EthanolRed rna-NM_001184651.1_EthanolRed cds-NP_878086.1_EthanolRed 98.1 100.0 Mismatch 1 1 0 False False False True False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005542.1:111609-111826:- gene-YHR007C-A_FaliES1 rna-NM_001184651.1_FaliES1 cds-NP_878086.1_FaliES1 98.6 100.0 Mismatch 1 1 0 False False False True False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000064.1:10388-10603:+ gene-YHR007C-A_JAY291 rna-NM_001184651.1_JAY291 cds-NP_878086.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005414.1:115185-115400:- gene-YHR007C-A_MUCL30387 rna-NM_001184651.1_MUCL30387 cds-NP_878086.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005446.1:117098-117315:- gene-YHR007C-A_MUCL30388 rna-NM_001184651.1_MUCL30388 cds-NP_878086.1_MUCL30388 98.1 100.0 Mismatch 1 1 0 False False False True False
MUCL39482 GCA_001738235.1 Sake Asia CM005286.1:110450-110667:- gene-YHR007C-A_MUCL39482 rna-NM_001184651.1_MUCL39482 cds-NP_878086.1_MUCL39482 98.6 100.0 Mismatch 1 1 0 False False False True False
MUCL42920 GCA_001738485.1 Bread Europe CM005430.1:115259-115476:- gene-YHR007C-A_MUCL42920 rna-NM_001184651.1_MUCL42920 cds-NP_878086.1_MUCL42920 98.1 100.0 Mismatch 1 1 0 False False False True False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011817.1:122432-122647:- gene-YHR007C-A_NCIM3186 rna-NM_001184651.1_NCIM3186 cds-NP_878086.1_NCIM3186 100.0 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005270.1:109866-110083:- gene-YHR007C-A_NCYC1407 rna-NM_001184651.1_NCYC1407 cds-NP_878086.1_NCYC1407 98.6 100.0 Mismatch 1 1 0 False False False True False
PE2H3 GCA_905220325.1 Bioethanol South America HG994147.1:112070-112285:- gene-YHR007C-A_PE2H3 rna-NM_001184651.1_PE2H3 cds-NP_878086.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999879.1:119511-119726:- gene-YHR007C-A_PE2H4 rna-NM_001184651.1_PE2H4 cds-NP_878086.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001140.6:122550-122765:- gene-YHR007C-A_S288C rna-NM_001184651.1_S288C cds-NP_878086.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000075.1:24103-24320:+ gene-YHR007C-A_SA1 rna-NM_001184651.1_SA1 cds-NP_878086.1_SA1 98.1 100.0 Mismatch 1 1 0 False False False True False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005494.1:112704-112921:- gene-YHR007C-A_ThermosaccDry rna-NM_001184651.1_ThermosaccDry cds-NP_878086.1_ThermosaccDry 98.1 100.0 Mismatch 1 1 0 False False False True False
VR1 GCA_001738595.1 Bioethanol South America CM005462.1:118227-118442:- gene-YHR007C-A_VR1 rna-NM_001184651.1_VR1 cds-NP_878086.1_VR1 99.0 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000017.1:103948-104165:- gene-YHR007C-A_ZTW1 rna-NM_001184651.1_ZTW1 cds-NP_878086.1_ZTW1 98.1 100.0 Mismatch 1 1 0 False False False True False

Additional files