Gene name: YHP1
Reference locus (S288C): YDR451C
Gene biotype: protein_coding
Description: Homeobox protein YHP1; Homeobox transcriptional repressor; binds Mcm1p and early cell cycle box (ECB) elements of cell cycle regulated genes, thereby restricting ECB-mediated transcription to the M/G1 interval; YHP1 has a paralog, YOX1, that arose from the whole genome duplication
Top 10 interactors (score): MCM1 (0.994); YOX1 (0.934); FKH1 (0.903); HCM1 (0.888); CDC28 (0.854); FKH2 (0.852); SWI4 (0.836); MBP1 (0.826); SFG1 (0.809); PCL1 (0.787); NDD1 (0.78); WHI5 (0.78); SWI5 (0.78); SWI6 (0.766); TOS4 (0.756); NRM1 (0.739); STB1 (0.694); FHL1 (0.676); CLB2 (0.661); HMLALPHA2 (0.642)
Homologues (species, bitscore): ARX (Homo sapiens, 52.4); Obox1 (Mus musculus, 52.8); shox (Danio rerio, 53.5); arx (Xenopus tropicalis, 52.8); repo (Drosophila melanogaster, 58.5); ceh-45 (Caenorhabditis elegans, 55.8); HDG7 (Arabidopsis thaliana, 55.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1301019-1302080:- | gene-YDR451C_AKU4011 | rna-NM_001180759.3_AKU4011 | cds-NP_010739.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000039.1:179384-180445:- | gene-YDR451C_BG1 | rna-NM_001180759.3_BG1 | cds-NP_010739.3_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1332469-1333530:- | gene-YDR451C_Bruggeman | rna-NM_001180759.3_Bruggeman | cds-NP_010739.3_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1309607-1310668:- | gene-YDR451C_CAT1 | rna-NM_001180759.3_CAT1 | cds-NP_010739.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1295325-1296386:- | gene-YDR451C_CBS1585 | rna-NM_001180759.3_CBS1585 | cds-NP_010739.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1314705-1315766:- | gene-YDR451C_CBS436 | rna-NM_001180759.3_CBS436 | cds-NP_010739.3_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1290966-1292027:- | gene-YDR451C_CBS6412 | rna-NM_001180759.3_CBS6412 | cds-NP_010739.3_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1313965-1315026:- | gene-YDR451C_CBS6413 | rna-NM_001180759.3_CBS6413 | cds-NP_010739.3_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1359794-1360855:- | gene-YDR451C_CENPK1137D | rna-NM_001180759.3_CENPK1137D | cds-NP_010739.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1304387-1305448:- | gene-YDR451C_EthanolRed | rna-NM_001180759.3_EthanolRed | cds-NP_010739.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1307940-1309001:- | gene-YDR451C_FaliES1 | rna-NM_001180759.3_FaliES1 | cds-NP_010739.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000026.1:6193-7254:- | gene-YDR451C_JAY291 | rna-NM_001180759.3_JAY291 | cds-NP_010739.3_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1314947-1316008:- | gene-YDR451C_MUCL30387 | rna-NM_001180759.3_MUCL30387 | cds-NP_010739.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1296979-1298040:- | gene-YDR451C_MUCL30388 | rna-NM_001180759.3_MUCL30388 | cds-NP_010739.3_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1286809-1287870:- | gene-YDR451C_MUCL39482 | rna-NM_001180759.3_MUCL39482 | cds-NP_010739.3_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1229615-1230676:- | gene-YDR451C_MUCL42920 | rna-NM_001180759.3_MUCL42920 | cds-NP_010739.3_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1361043-1362104:- | gene-YDR451C_NCIM3186 | rna-NM_001180759.3_NCIM3186 | cds-NP_010739.3_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1300582-1301643:- | gene-YDR451C_NCYC1407 | rna-NM_001180759.3_NCYC1407 | cds-NP_010739.3_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1311442-1312503:- | gene-YDR451C_PE2H3 | rna-NM_001180759.3_PE2H3 | cds-NP_010739.3_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1316999-1318060:- | gene-YDR451C_PE2H4 | rna-NM_001180759.3_PE2H4 | cds-NP_010739.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1361120-1362181:- | gene-YDR451C_S288C | rna-NM_001180759.3_S288C | cds-NP_010739.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:254983-256044:+ | gene-YDR451C_SA1 | rna-NM_001180759.3_SA1 | cds-NP_010739.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1312162-1313223:- | gene-YDR451C_ThermosaccDry | rna-NM_001180759.3_ThermosaccDry | cds-NP_010739.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1327893-1328954:- | gene-YDR451C_VR1 | rna-NM_001180759.3_VR1 | cds-NP_010739.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:354826-355887:- | gene-YDR451C_ZTW1 | rna-NM_001180759.3_ZTW1 | cds-NP_010739.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1315219-1316283:- | gene-YDR451C_Sparadoxus | rna-NM_001180759.3_Sparadoxus | cds-NP_010739.3_Sparadoxus | 87.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |