Gene name: YHL042W
Reference locus (S288C): YHL042W
Gene biotype: protein_coding
Description: Putative uncharacterized protein YHL042W; Protein of unknown function; member of the DUP380 subfamily of conserved, often subtelomerically-encoded proteins; SWAT-GFP and mCherry fusion proteins localize to the vacuole
Top 10 interactors (score): PAU13 (0.872); YHL041W (0.813); YHL046W-A (0.813); YHL048C-A (0.813); YKL223W (0.78); YGL214W (0.76); ECM34 (0.758); YHL045W (0.748); PAU16 (0.747); YKL225W (0.746); PMT7 (0.746); OPI7 (0.745); ERD1 (0.713); YHL049C (0.705); SRY1 (0.698); YCL049C (0.697); YKL222C (0.696); YHL044W (0.695); YHL050C (0.695); COA1 (0.66)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:10522-10974:+ | gene-YHL042W_AKU4011 | rna-NM_001179122.1_AKU4011 | cds-NP_011821.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000180.1:65847-66299:- | gene-YHL042W_BG1 | rna-NM_001179122.1_BG1 | cds-NP_011821.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:17189-17641:+ | gene-YHL042W_Bruggeman | rna-NM_001179122.1_Bruggeman | cds-NP_011821.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:11442-11894:+ | gene-YHL042W_CAT1 | rna-NM_001179122.1_CAT1 | cds-NP_011821.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:11126-11578:+ | gene-YHL042W_CBS1585 | rna-NM_001179122.1_CBS1585 | cds-NP_011821.1_CBS1585 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:3711-4166:+ | gene-YHL042W_CBS436 | rna-NM_001179122.1_CBS436 | cds-NP_011821.1_CBS436 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:11075-11527:+ | gene-YHL042W_CBS6412 | rna-NM_001179122.1_CBS6412 | cds-NP_011821.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:10541-10993:+ | gene-YHL042W_CBS6413 | rna-NM_001179122.1_CBS6413 | cds-NP_011821.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:8833-9285:+ | gene-YHL042W_CENPK1137D | rna-NM_001179122.1_CENPK1137D | cds-NP_011821.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:10755-11207:+ | gene-YHL042W_EthanolRed | rna-NM_001179122.1_EthanolRed | cds-NP_011821.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:11071-11523:+ | gene-YHL042W_FaliES1 | rna-NM_001179122.1_FaliES1 | cds-NP_011821.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000157.1:3032-3484:+ | gene-YHL042W_JAY291 | rna-NM_001179122.1_JAY291 | cds-NP_011821.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:13023-13475:+ | gene-YHL042W_MUCL30387 | rna-NM_001179122.1_MUCL30387 | cds-NP_011821.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:14860-15312:+ | gene-YHL042W_MUCL30388 | rna-NM_001179122.1_MUCL30388 | cds-NP_011821.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:10117-10569:+ | gene-YHL042W_MUCL39482 | rna-NM_001179122.1_MUCL39482 | cds-NP_011821.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:14088-14540:+ | gene-YHL042W_MUCL42920 | rna-NM_001179122.1_MUCL42920 | cds-NP_011821.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:15549-16001:+ | gene-YHL042W_NCIM3186 | rna-NM_001179122.1_NCIM3186 | cds-NP_011821.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:9602-10054:+ | gene-YHL042W_NCYC1407 | rna-NM_001179122.1_NCYC1407 | cds-NP_011821.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:5895-6347:+ | gene-YHL042W_PE2H3 | rna-NM_001179122.1_PE2H3 | cds-NP_011821.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:13271-13723:+ | gene-YHL042W_PE2H4 | rna-NM_001179122.1_PE2H4 | cds-NP_011821.1_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:15667-16119:+ | gene-YHL042W_S288C | rna-NM_001179122.1_S288C | cds-NP_011821.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:1-415:+ | gene-YHL042W_SA1 | rna-NM_001179122.1_SA1 | cds-NP_011821.1_SA1 | 91.6 | 91.6 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:12191-12643:+ | gene-YHL042W_ThermosaccDry | rna-NM_001179122.1_ThermosaccDry | cds-NP_011821.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:16878-17330:+ | gene-YHL042W_VR1 | rna-NM_001179122.1_VR1 | cds-NP_011821.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:3370-3822:+ | gene-YHL042W_ZTW1 | rna-NM_001179122.1_ZTW1 | cds-NP_011821.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |