Gene name: YHL026C
Reference locus (S288C): YHL026C
Gene biotype: protein_coding
Description: Uncharacterized protein YHL026C; Putative protein of unknown function; transcriptionally regulated by Upc2p via an upstream sterol response element; SWAT-GFP fusion protein localizes to the cell periphery, while mCherry fusion localizes to both the cell periphery and vacuole; YHL026C is not an essential gene; in 2005 the start site was moved 141 nt upstream (see Locus History)
Top 10 interactors (score): YML083C (0.772); YML082W (0.77); CAB1 (0.76); RBH1 (0.67); TGL1 (0.569); AIM6 (0.564); DCW1 (0.537); TYW1 (0.515); DED81 (0.499); ERG2 (0.497); TMC1 (0.483); YHR020W (0.483); GUD1 (0.481); YDL012C (0.48); UPC2 (0.48); FRQ1 (0.467); YDL218W (0.463); GAD1 (0.454); CUZ1 (0.453); YLR285C-A (0.435)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:48115-49062:- | gene-YHL026C_AKU4011 | rna-NM_001179106.1_AKU4011 | cds-NP_011837.2_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000180.1:27716-28663:+ | gene-YHL026C_BG1 | rna-NM_001179106.1_BG1 | cds-NP_011837.2_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:54757-55704:- | gene-YHL026C_Bruggeman | rna-NM_001179106.1_Bruggeman | cds-NP_011837.2_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:48990-49937:- | gene-YHL026C_CAT1 | rna-NM_001179106.1_CAT1 | cds-NP_011837.2_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:48716-49663:- | gene-YHL026C_CBS1585 | rna-NM_001179106.1_CBS1585 | cds-NP_011837.2_CBS1585 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:41243-42190:- | gene-YHL026C_CBS436 | rna-NM_001179106.1_CBS436 | cds-NP_011837.2_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:48663-49610:- | gene-YHL026C_CBS6412 | rna-NM_001179106.1_CBS6412 | cds-NP_011837.2_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:48126-49073:- | gene-YHL026C_CBS6413 | rna-NM_001179106.1_CBS6413 | cds-NP_011837.2_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:46382-47329:- | gene-YHL026C_CENPK1137D | rna-NM_001179106.1_CENPK1137D | cds-NP_011837.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:48347-49294:- | gene-YHL026C_EthanolRed | rna-NM_001179106.1_EthanolRed | cds-NP_011837.2_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:48663-49610:- | gene-YHL026C_FaliES1 | rna-NM_001179106.1_FaliES1 | cds-NP_011837.2_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000003.1:17352-18299:- | gene-YHL026C_JAY291 | rna-NM_001179106.1_JAY291 | cds-NP_011837.2_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:50596-51543:- | gene-YHL026C_MUCL30387 | rna-NM_001179106.1_MUCL30387 | cds-NP_011837.2_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:52433-53380:- | gene-YHL026C_MUCL30388 | rna-NM_001179106.1_MUCL30388 | cds-NP_011837.2_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:47707-48654:- | gene-YHL026C_MUCL39482 | rna-NM_001179106.1_MUCL39482 | cds-NP_011837.2_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:51677-52624:- | gene-YHL026C_MUCL42920 | rna-NM_001179106.1_MUCL42920 | cds-NP_011837.2_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:53101-54048:- | gene-YHL026C_NCIM3186 | rna-NM_001179106.1_NCIM3186 | cds-NP_011837.2_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:47189-48136:- | gene-YHL026C_NCYC1407 | rna-NM_001179106.1_NCYC1407 | cds-NP_011837.2_NCYC1407 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:43426-44373:- | gene-YHL026C_PE2H3 | rna-NM_001179106.1_PE2H3 | cds-NP_011837.2_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:50867-51814:- | gene-YHL026C_PE2H4 | rna-NM_001179106.1_PE2H4 | cds-NP_011837.2_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:53219-54166:- | gene-YHL026C_S288C | rna-NM_001179106.1_S288C | cds-NP_011837.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:37528-38475:- | gene-YHL026C_SA1 | rna-NM_001179106.1_SA1 | cds-NP_011837.2_SA1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:49758-50705:- | gene-YHL026C_ThermosaccDry | rna-NM_001179106.1_ThermosaccDry | cds-NP_011837.2_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:54471-55418:- | gene-YHL026C_VR1 | rna-NM_001179106.1_VR1 | cds-NP_011837.2_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:40965-41912:- | gene-YHL026C_ZTW1 | rna-NM_001179106.1_ZTW1 | cds-NP_011837.2_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:47288-48235:- | gene-YHL026C_Sparadoxus | rna-NM_001179106.1_Sparadoxus | cds-NP_011837.2_Sparadoxus | 91.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |