Gene name: YHL017W
Reference locus (S288C): YHL017W
Gene biotype: protein_coding
Description: Uncharacterized membrane protein YHL071W; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein co-localizes with clathrin-coated vesicles; YHL017W has a paralog, PTM1, that arose from the whole genome duplication; Belongs to the LU7TM family
Top 10 interactors (score): AVL9 (0.773); LDB17 (0.76); YAP1802 (0.749); SWA2 (0.727); BNA3 (0.607); DUS3 (0.564); SEC15 (0.525); SNC1 (0.525); DCP1 (0.485); CCC2 (0.481); PCA1 (0.481); RRP9 (0.48); APC1 (0.473); APM4 (0.45)
Homologues (species, bitscore): TMEM87B (Homo sapiens, 79.0); Tmem87b (Mus musculus, 77.8); TMEM87A (Danio rerio, 68.2); tmem87b (Xenopus tropicalis, 84.3); CG17660 (Drosophila melanogaster, 81.3); C52B9.4 (Caenorhabditis elegans, 92.0); AT1G72480 (Arabidopsis thaliana, 89.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:65226-66824:+ | gene-YHL017W_AKU4011 | rna-NM_001179097.1_AKU4011 | cds-NP_011846.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000180.1:9984-11582:- | gene-YHL017W_BG1 | rna-NM_001179097.1_BG1 | cds-NP_011846.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:71862-73460:+ | gene-YHL017W_Bruggeman | rna-NM_001179097.1_Bruggeman | cds-NP_011846.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:66071-67669:+ | gene-YHL017W_CAT1 | rna-NM_001179097.1_CAT1 | cds-NP_011846.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:65822-67420:+ | gene-YHL017W_CBS1585 | rna-NM_001179097.1_CBS1585 | cds-NP_011846.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:58328-59926:+ | gene-YHL017W_CBS436 | rna-NM_001179097.1_CBS436 | cds-NP_011846.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:65772-67370:+ | gene-YHL017W_CBS6412 | rna-NM_001179097.1_CBS6412 | cds-NP_011846.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:65201-66799:+ | gene-YHL017W_CBS6413 | rna-NM_001179097.1_CBS6413 | cds-NP_011846.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:63437-65035:+ | gene-YHL017W_CENPK1137D | rna-NM_001179097.1_CENPK1137D | cds-NP_011846.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:65449-67047:+ | gene-YHL017W_EthanolRed | rna-NM_001179097.1_EthanolRed | cds-NP_011846.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:65765-67363:+ | gene-YHL017W_FaliES1 | rna-NM_001179097.1_FaliES1 | cds-NP_011846.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000003.1:34434-36032:+ | gene-YHL017W_JAY291 | rna-NM_001179097.1_JAY291 | cds-NP_011846.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:68849-70447:+ | gene-YHL017W_MUCL30387 | rna-NM_001179097.1_MUCL30387 | cds-NP_011846.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:69547-71145:+ | gene-YHL017W_MUCL30388 | rna-NM_001179097.1_MUCL30388 | cds-NP_011846.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:64807-66405:+ | gene-YHL017W_MUCL39482 | rna-NM_001179097.1_MUCL39482 | cds-NP_011846.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:68764-70362:+ | gene-YHL017W_MUCL42920 | rna-NM_001179097.1_MUCL42920 | cds-NP_011846.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:70158-71756:+ | gene-YHL017W_NCIM3186 | rna-NM_001179097.1_NCIM3186 | cds-NP_011846.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:64267-65865:+ | gene-YHL017W_NCYC1407 | rna-NM_001179097.1_NCYC1407 | cds-NP_011846.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:60508-62106:+ | gene-YHL017W_PE2H3 | rna-NM_001179097.1_PE2H3 | cds-NP_011846.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:67949-69547:+ | gene-YHL017W_PE2H4 | rna-NM_001179097.1_PE2H4 | cds-NP_011846.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:70276-71874:+ | gene-YHL017W_S288C | rna-NM_001179097.1_S288C | cds-NP_011846.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:54605-56203:+ | gene-YHL017W_SA1 | rna-NM_001179097.1_SA1 | cds-NP_011846.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:66860-68458:+ | gene-YHL017W_ThermosaccDry | rna-NM_001179097.1_ThermosaccDry | cds-NP_011846.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:71593-73191:+ | gene-YHL017W_VR1 | rna-NM_001179097.1_VR1 | cds-NP_011846.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:58034-59632:+ | gene-YHL017W_ZTW1 | rna-NM_001179097.1_ZTW1 | cds-NP_011846.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:64358-65956:+ | gene-YHL017W_Sparadoxus | rna-NM_001179097.1_Sparadoxus | cds-NP_011846.1_Sparadoxus | 90.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |