Gene name: YGR283C
Reference locus (S288C): YGR283C
Gene biotype: protein_coding
Description: Putative methyltransferase; may interact with ribosomes, based on co-purification experiments; predicted to be involved in ribosome biogenesis; null mutant is resistant to fluconazole; GFP-fusion protein localizes to the nucleolus; YGR283C has a paralog, YMR310C, that arose from the whole genome duplication; Belongs to the class IV-like SAM-binding methyltransferase superfamily
Top 10 interactors (score): RCM1 (0.962); EFM2 (0.935); MRM1 (0.92); SFM1 (0.914); YMR310C (0.908); NIP7 (0.907); CBF5 (0.907); BMT5 (0.89); UTP25 (0.86); PUF6 (0.86); MRT4 (0.841); GAR1 (0.84); CIC1 (0.821); NOG1 (0.802); NHP2 (0.801); RRT14 (0.799); EMG1 (0.797); BMT2 (0.79); HMT1 (0.784); YMR099C (0.781)
Homologues (species, bitscore): C9orf114 (Homo sapiens, 72.0); D2Wsu81e (Mus musculus, 70.5); zgc:101748 (Danio rerio, 68.6); c9orf114 (Xenopus tropicalis, 70.5); CG12128 (Drosophila melanogaster, 59.3); B0361.6 (Caenorhabditis elegans, 50.4); AT5G19300 (Arabidopsis thaliana, 70.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:1024431-1025456:- | gene-YGR283C_AKU4011 | rna-NM_001181412.3_AKU4011 | cds-NP_011799.3_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000098.1:2661-3686:+ | gene-YGR283C_BG1 | rna-NM_001181412.3_BG1 | cds-NP_011799.3_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:1032995-1034020:- | gene-YGR283C_Bruggeman | rna-NM_001181412.3_Bruggeman | cds-NP_011799.3_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:1032469-1033494:- | gene-YGR283C_CAT1 | rna-NM_001181412.3_CAT1 | cds-NP_011799.3_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:1027299-1028324:- | gene-YGR283C_CBS1585 | rna-NM_001181412.3_CBS1585 | cds-NP_011799.3_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:1030968-1031993:- | gene-YGR283C_CBS436 | rna-NM_001181412.3_CBS436 | cds-NP_011799.3_CBS436 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:1018191-1019216:- | gene-YGR283C_CBS6412 | rna-NM_001181412.3_CBS6412 | cds-NP_011799.3_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:1024244-1025269:- | gene-YGR283C_CBS6413 | rna-NM_001181412.3_CBS6413 | cds-NP_011799.3_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:1058740-1059764:- | gene-YGR283C_CENPK1137D | rna-NM_001181412.3_CENPK1137D | cds-NP_011799.3_CENPK1137D | 99.9 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:1012270-1013295:- | gene-YGR283C_EthanolRed | rna-NM_001181412.3_EthanolRed | cds-NP_011799.3_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:1017076-1018101:- | gene-YGR283C_FaliES1 | rna-NM_001181412.3_FaliES1 | cds-NP_011799.3_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000076.1:12162-13187:+ | gene-YGR283C_JAY291 | rna-NM_001181412.3_JAY291 | cds-NP_011799.3_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:1030728-1031753:- | gene-YGR283C_MUCL30387 | rna-NM_001181412.3_MUCL30387 | cds-NP_011799.3_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:1028861-1029886:- | gene-YGR283C_MUCL30388 | rna-NM_001181412.3_MUCL30388 | cds-NP_011799.3_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:1022405-1023430:- | gene-YGR283C_MUCL39482 | rna-NM_001181412.3_MUCL39482 | cds-NP_011799.3_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:1040327-1041352:- | gene-YGR283C_MUCL42920 | rna-NM_001181412.3_MUCL42920 | cds-NP_011799.3_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:1059015-1060040:- | gene-YGR283C_NCIM3186 | rna-NM_001181412.3_NCIM3186 | cds-NP_011799.3_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:1018038-1019063:- | gene-YGR283C_NCYC1407 | rna-NM_001181412.3_NCYC1407 | cds-NP_011799.3_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:1043278-1044303:- | gene-YGR283C_PE2H3 | rna-NM_001181412.3_PE2H3 | cds-NP_011799.3_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:1048117-1049142:- | gene-YGR283C_PE2H4 | rna-NM_001181412.3_PE2H4 | cds-NP_011799.3_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:1059015-1060040:- | gene-YGR283C_S288C | rna-NM_001181412.3_S288C | cds-NP_011799.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000063.1:57308-58333:- | gene-YGR283C_SA1 | rna-NM_001181412.3_SA1 | cds-NP_011799.3_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:1037596-1038621:- | gene-YGR283C_ThermosaccDry | rna-NM_001181412.3_ThermosaccDry | cds-NP_011799.3_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:1143455-1144480:- | gene-YGR283C_VR1 | rna-NM_001181412.3_VR1 | cds-NP_011799.3_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:339008-340032:- | gene-YGR283C_ZTW1 | rna-NM_001181412.3_ZTW1 | cds-NP_011799.3_ZTW1 | 99.4 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:1029737-1030762:- | gene-YGR283C_Sparadoxus | rna-NM_001181412.3_Sparadoxus | cds-NP_011799.3_Sparadoxus | 85.7 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |