YGR210C (YGR210C)


Gene profile

Gene name: YGR210C
Reference locus (S288C): YGR210C
Gene biotype: protein_coding

Description: Uncharacterized GTP-binding protein YGR210C; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm

Top 10 interactors (score): ZPR1 (0.88); TDA10 (0.811); TEF4 (0.776); YAR1 (0.699); YAP1802 (0.699); NIS1 (0.692); GCD11 (0.658); LSC2 (0.633); MPC3 (0.619); APJ1 (0.583); TAH11 (0.572); ARP5 (0.544); TCP1 (0.526); RPL28 (0.521); FPR1 (0.509); MDJ1 (0.505); PMT2 (0.497); SSA2 (0.474); ADE3 (0.469); SET1 (0.469)

Homologues (species, bitscore): OLA1 (Homo sapiens, 86.7); Ola1 (Mus musculus, 86.7); ola1 (Danio rerio, 88.6); ola1 (Xenopus tropicalis, 84.3); CG1354 (Drosophila melanogaster, 81.6); tag-210 (Caenorhabditis elegans, 83.2); AT1G30580 (Arabidopsis thaliana, 88.6)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:879022-880257:- gene-YGR210C_AKU4011 rna-NM_001181339.1_AKU4011 cds-NP_011726.1_AKU4011 100.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000021.1:159403-160638:- gene-YGR210C_BG1 rna-NM_001181339.1_BG1 cds-NP_011726.1_BG1 99.5 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:887221-888456:- gene-YGR210C_Bruggeman rna-NM_001181339.1_Bruggeman cds-NP_011726.1_Bruggeman 99.8 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:885214-886449:- gene-YGR210C_CAT1 rna-NM_001181339.1_CAT1 cds-NP_011726.1_CAT1 99.7 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:882460-883695:- gene-YGR210C_CBS1585 rna-NM_001181339.1_CBS1585 cds-NP_011726.1_CBS1585 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005349.1:885811-887046:- gene-YGR210C_CBS436 rna-NM_001181339.1_CBS436 cds-NP_011726.1_CBS436 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:873332-874567:- gene-YGR210C_CBS6412 rna-NM_001181339.1_CBS6412 cds-NP_011726.1_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:879391-880626:- gene-YGR210C_CBS6413 rna-NM_001181339.1_CBS6413 cds-NP_011726.1_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:913215-914450:- gene-YGR210C_CENPK1137D rna-NM_001181339.1_CENPK1137D cds-NP_011726.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:867841-869076:- gene-YGR210C_EthanolRed rna-NM_001181339.1_EthanolRed cds-NP_011726.1_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:872232-873467:- gene-YGR210C_FaliES1 rna-NM_001181339.1_FaliES1 cds-NP_011726.1_FaliES1 100.0 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000148.1:29956-31191:- gene-YGR210C_JAY291 rna-NM_001181339.1_JAY291 cds-NP_011726.1_JAY291 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:884706-885941:- gene-YGR210C_MUCL30387 rna-NM_001181339.1_MUCL30387 cds-NP_011726.1_MUCL30387 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:884390-885625:- gene-YGR210C_MUCL30388 rna-NM_001181339.1_MUCL30388 cds-NP_011726.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:877536-878771:- gene-YGR210C_MUCL39482 rna-NM_001181339.1_MUCL39482 cds-NP_011726.1_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:895082-896317:- gene-YGR210C_MUCL42920 rna-NM_001181339.1_MUCL42920 cds-NP_011726.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:913503-914738:- gene-YGR210C_NCIM3186 rna-NM_001181339.1_NCIM3186 cds-NP_011726.1_NCIM3186 99.8 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:873192-874427:- gene-YGR210C_NCYC1407 rna-NM_001181339.1_NCYC1407 cds-NP_011726.1_NCYC1407 99.9 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:897798-899033:- gene-YGR210C_PE2H3 rna-NM_001181339.1_PE2H3 cds-NP_011726.1_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:902908-904143:- gene-YGR210C_PE2H4 rna-NM_001181339.1_PE2H4 cds-NP_011726.1_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:913503-914738:- gene-YGR210C_S288C rna-NM_001181339.1_S288C cds-NP_011726.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000045.1:86653-87888:+ gene-YGR210C_SA1 rna-NM_001181339.1_SA1 cds-NP_011726.1_SA1 99.5 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:892743-893978:- gene-YGR210C_ThermosaccDry rna-NM_001181339.1_ThermosaccDry cds-NP_011726.1_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:997226-998461:- gene-YGR210C_VR1 rna-NM_001181339.1_VR1 cds-NP_011726.1_VR1 99.5 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000016.1:194185-195420:- gene-YGR210C_ZTW1 rna-NM_001181339.1_ZTW1 cds-NP_011726.1_ZTW1 99.8 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:884658-885893:- gene-YGR210C_Sparadoxus rna-NM_001181339.1_Sparadoxus cds-NP_011726.1_Sparadoxus 93.1 100.0 Verified 1 1 1 False True False False False

Additional files