Gene name: YGR130C
Reference locus (S288C): YGR130C
Gene biotype: protein_coding
Description: Uncharacterized protein YGR130C; Component of the eisosome with unknown function; GFP-fusion protein localizes to the cytoplasm; specifically phosphorylated in vitro by mammalian diphosphoinositol pentakisphosphate (IP7)
Top 10 interactors (score): EIS1 (0.975); PIL1 (0.889); SEG1 (0.878); SEG2 (0.814); OM45 (0.803); MSC3 (0.788); YPL199C (0.711); LSP1 (0.703); YML096W (0.694); UBP9 (0.654); PST2 (0.633); MST27 (0.614); SDS22 (0.597); TCB3 (0.592); ERG24 (0.586); SAM37 (0.586); MLF3 (0.574); INP51 (0.568); GVP36 (0.562); NCE102 (0.536)
Homologues (species, bitscore): CHD9 (Homo sapiens, 52.0); Chd9 (Mus musculus, 50.8); lama3 (Xenopus tropicalis, 52.4); dp (Drosophila melanogaster, 56.6); fbn-1 (Caenorhabditis elegans, 53.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:730376-732820:- | gene-YGR130C_AKU4011 | rna-NM_001181259.1_AKU4011 | cds-NP_011646.1_AKU4011 | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:9144-11594:- | gene-YGR130C_BG1 | rna-NM_001181259.1_BG1 | cds-NP_011646.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:733173-735617:- | gene-YGR130C_Bruggeman | rna-NM_001181259.1_Bruggeman | cds-NP_011646.1_Bruggeman | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:731825-734365:- | gene-YGR130C_CAT1 | rna-NM_001181259.1_CAT1 | cds-NP_011646.1_CAT1 | 95.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:731359-733803:- | gene-YGR130C_CBS1585 | rna-NM_001181259.1_CBS1585 | cds-NP_011646.1_CBS1585 | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:734744-737194:- | gene-YGR130C_CBS436 | rna-NM_001181259.1_CBS436 | cds-NP_011646.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:723035-725479:- | gene-YGR130C_CBS6412 | rna-NM_001181259.1_CBS6412 | cds-NP_011646.1_CBS6412 | 99.1 | 99.7 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:727968-730412:- | gene-YGR130C_CBS6413 | rna-NM_001181259.1_CBS6413 | cds-NP_011646.1_CBS6413 | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:751106-753556:- | gene-YGR130C_CENPK1137D | rna-NM_001181259.1_CENPK1137D | cds-NP_011646.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:717400-719844:- | gene-YGR130C_EthanolRed | rna-NM_001181259.1_EthanolRed | cds-NP_011646.1_EthanolRed | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:721261-723705:- | gene-YGR130C_FaliES1 | rna-NM_001181259.1_FaliES1 | cds-NP_011646.1_FaliES1 | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000305.1:10138-12588:+ | gene-YGR130C_JAY291 | rna-NM_001181259.1_JAY291 | cds-NP_011646.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:840313-842757:- | gene-YGR130C_MUCL30387 | rna-NM_001181259.1_MUCL30387 | cds-NP_011646.1_MUCL30387 | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:733188-735632:- | gene-YGR130C_MUCL30388 | rna-NM_001181259.1_MUCL30388 | cds-NP_011646.1_MUCL30388 | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:727085-729529:- | gene-YGR130C_MUCL39482 | rna-NM_001181259.1_MUCL39482 | cds-NP_011646.1_MUCL39482 | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:737184-739628:- | gene-YGR130C_MUCL42920 | rna-NM_001181259.1_MUCL42920 | cds-NP_011646.1_MUCL42920 | 99.2 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:751394-753844:- | gene-YGR130C_NCIM3186 | rna-NM_001181259.1_NCIM3186 | cds-NP_011646.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:721786-724230:- | gene-YGR130C_NCYC1407 | rna-NM_001181259.1_NCYC1407 | cds-NP_011646.1_NCYC1407 | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:741635-744085:- | gene-YGR130C_PE2H3 | rna-NM_001181259.1_PE2H3 | cds-NP_011646.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:746745-749195:- | gene-YGR130C_PE2H4 | rna-NM_001181259.1_PE2H4 | cds-NP_011646.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:751394-753844:- | gene-YGR130C_S288C | rna-NM_001181259.1_S288C | cds-NP_011646.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000015.1:172535-174979:- | gene-YGR130C_SA1 | rna-NM_001181259.1_SA1 | cds-NP_011646.1_SA1 | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:741884-744328:- | gene-YGR130C_ThermosaccDry | rna-NM_001181259.1_ThermosaccDry | cds-NP_011646.1_ThermosaccDry | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:845390-847832:- | gene-YGR130C_VR1 | rna-NM_001181259.1_VR1 | cds-NP_011646.1_VR1 | 99.3 | 99.6 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:44030-46474:- | gene-YGR130C_ZTW1 | rna-NM_001181259.1_ZTW1 | cds-NP_011646.1_ZTW1 | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:731651-734125:- | gene-YGR130C_Sparadoxus | rna-NM_001181259.1_Sparadoxus | cds-NP_011646.1_Sparadoxus | 82.3 | 97.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |