Gene name: YGR122W
Reference locus (S288C): YGR122W
Gene biotype: protein_coding
Description: Uncharacterized protein YGR122W; Protein that may be involved in pH regulation; probable ortholog of A. nidulans PalC, which is involved in pH regulation and binds to the ESCRT-III complex; null mutant does not properly process Rim101p and has decreased resistance to rapamycin; GFP-fusion protein is cytoplasmic; relative distribution to cytoplasm increases upon DNA replication stress
Top 10 interactors (score): RIM20 (0.929); RIM101 (0.921); RIM13 (0.89); SNF7 (0.841); DFG16 (0.833); RIM9 (0.813); RIM8 (0.813); RIM21 (0.811); OPI8 (0.712); YHL005C (0.696); YGL260W (0.696); YOR389W (0.694); STP22 (0.676); SOV1 (0.673); BRO1 (0.65); YPL277C (0.618); YNL190W (0.573); VPS24 (0.569); INA22 (0.568); YJR061W (0.567)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:713278-714486:+ | gene-YGR122W_AKU4011 | rna-NM_001181251.3_AKU4011 | cds-NP_011637.3_AKU4011 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000008.1:921-2129:- | gene-YGR122W_BG1 | rna-NM_001181251.3_BG1 | cds-NP_011637.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:714920-716128:+ | gene-YGR122W_Bruggeman | rna-NM_001181251.3_Bruggeman | cds-NP_011637.3_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:713658-714866:+ | gene-YGR122W_CAT1 | rna-NM_001181251.3_CAT1 | cds-NP_011637.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:714260-715468:+ | gene-YGR122W_CBS1585 | rna-NM_001181251.3_CBS1585 | cds-NP_011637.3_CBS1585 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:715866-717074:+ | gene-YGR122W_CBS436 | rna-NM_001181251.3_CBS436 | cds-NP_011637.3_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:705936-707144:+ | gene-YGR122W_CBS6412 | rna-NM_001181251.3_CBS6412 | cds-NP_011637.3_CBS6412 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:710870-712078:+ | gene-YGR122W_CBS6413 | rna-NM_001181251.3_CBS6413 | cds-NP_011637.3_CBS6413 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:733651-734859:+ | gene-YGR122W_CENPK1137D | rna-NM_001181251.3_CENPK1137D | cds-NP_011637.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:700299-701507:+ | gene-YGR122W_EthanolRed | rna-NM_001181251.3_EthanolRed | cds-NP_011637.3_EthanolRed | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:704160-705368:+ | gene-YGR122W_FaliES1 | rna-NM_001181251.3_FaliES1 | cds-NP_011637.3_FaliES1 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000223.1:2906-4114:+ | gene-YGR122W_JAY291 | rna-NM_001181251.3_JAY291 | cds-NP_011637.3_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:714343-715551:+ | gene-YGR122W_MUCL30387 | rna-NM_001181251.3_MUCL30387 | cds-NP_011637.3_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:714750-715958:+ | gene-YGR122W_MUCL30388 | rna-NM_001181251.3_MUCL30388 | cds-NP_011637.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:709986-711194:+ | gene-YGR122W_MUCL39482 | rna-NM_001181251.3_MUCL39482 | cds-NP_011637.3_MUCL39482 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:719741-720949:+ | gene-YGR122W_MUCL42920 | rna-NM_001181251.3_MUCL42920 | cds-NP_011637.3_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:733935-735143:+ | gene-YGR122W_NCIM3186 | rna-NM_001181251.3_NCIM3186 | cds-NP_011637.3_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:704687-705895:+ | gene-YGR122W_NCYC1407 | rna-NM_001181251.3_NCYC1407 | cds-NP_011637.3_NCYC1407 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:724174-725382:+ | gene-YGR122W_PE2H3 | rna-NM_001181251.3_PE2H3 | cds-NP_011637.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:729284-730492:+ | gene-YGR122W_PE2H4 | rna-NM_001181251.3_PE2H4 | cds-NP_011637.3_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:733935-735143:+ | gene-YGR122W_S288C | rna-NM_001181251.3_S288C | cds-NP_011637.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000015.1:155285-156493:+ | gene-YGR122W_SA1 | rna-NM_001181251.3_SA1 | cds-NP_011637.3_SA1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:724788-725996:+ | gene-YGR122W_ThermosaccDry | rna-NM_001181251.3_ThermosaccDry | cds-NP_011637.3_ThermosaccDry | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:827208-828416:+ | gene-YGR122W_VR1 | rna-NM_001181251.3_VR1 | cds-NP_011637.3_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:26932-28140:+ | gene-YGR122W_ZTW1 | rna-NM_001181251.3_ZTW1 | cds-NP_011637.3_ZTW1 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:714373-715581:+ | gene-YGR122W_Sparadoxus | rna-NM_001181251.3_Sparadoxus | cds-NP_011637.3_Sparadoxus | 86.7 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |