YGR117C (YGR117C)

Gene profile

Gene name: YGR117C
Reference locus (S288C): YGR117C
Gene biotype: protein_coding

Description: Uncharacterized protein YGR117C; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:704364-705797:- gene-YGR117C_AKU4011 rna-NM_001181246.3_AKU4011 cds-NP_011632.3_AKU4011 98.7 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000188.1:12838-14268:- gene-YGR117C_BG1 rna-NM_001181246.3_BG1 cds-NP_011632.3_BG1 99.5 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:706028-707461:- gene-YGR117C_Bruggeman rna-NM_001181246.3_Bruggeman cds-NP_011632.3_Bruggeman 98.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:704257-705687:- gene-YGR117C_CAT1 rna-NM_001181246.3_CAT1 cds-NP_011632.3_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:705354-706787:- gene-YGR117C_CBS1585 rna-NM_001181246.3_CBS1585 cds-NP_011632.3_CBS1585 98.7 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005349.1:706981-708411:- gene-YGR117C_CBS436 rna-NM_001181246.3_CBS436 cds-NP_011632.3_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:697023-698456:- gene-YGR117C_CBS6412 rna-NM_001181246.3_CBS6412 cds-NP_011632.3_CBS6412 98.7 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:701957-703390:- gene-YGR117C_CBS6413 rna-NM_001181246.3_CBS6413 cds-NP_011632.3_CBS6413 98.7 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:724767-726197:- gene-YGR117C_CENPK1137D rna-NM_001181246.3_CENPK1137D cds-NP_011632.3_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:691447-692880:- gene-YGR117C_EthanolRed rna-NM_001181246.3_EthanolRed cds-NP_011632.3_EthanolRed 98.7 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:695256-696689:- gene-YGR117C_FaliES1 rna-NM_001181246.3_FaliES1 cds-NP_011632.3_FaliES1 98.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000092.1:946-2376:+ gene-YGR117C_JAY291 rna-NM_001181246.3_JAY291 cds-NP_011632.3_JAY291 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:704756-706186:- gene-YGR117C_MUCL30387 rna-NM_001181246.3_MUCL30387 cds-NP_011632.3_MUCL30387 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:705840-707273:- gene-YGR117C_MUCL30388 rna-NM_001181246.3_MUCL30388 cds-NP_011632.3_MUCL30388 98.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:701081-702514:- gene-YGR117C_MUCL39482 rna-NM_001181246.3_MUCL39482 cds-NP_011632.3_MUCL39482 98.7 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:710850-712283:- gene-YGR117C_MUCL42920 rna-NM_001181246.3_MUCL42920 cds-NP_011632.3_MUCL42920 98.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:725049-726479:- gene-YGR117C_NCIM3186 rna-NM_001181246.3_NCIM3186 cds-NP_011632.3_NCIM3186 98.7 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:695774-697207:- gene-YGR117C_NCYC1407 rna-NM_001181246.3_NCYC1407 cds-NP_011632.3_NCYC1407 98.7 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:709352-710782:- gene-YGR117C_PE2H3 rna-NM_001181246.3_PE2H3 cds-NP_011632.3_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:714470-715900:- gene-YGR117C_PE2H4 rna-NM_001181246.3_PE2H4 cds-NP_011632.3_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:725049-726479:- gene-YGR117C_S288C rna-NM_001181246.3_S288C cds-NP_011632.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000015.1:146365-147795:- gene-YGR117C_SA1 rna-NM_001181246.3_SA1 cds-NP_011632.3_SA1 99.7 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:715636-717069:- gene-YGR117C_ThermosaccDry rna-NM_001181246.3_ThermosaccDry cds-NP_011632.3_ThermosaccDry 98.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:818070-819500:- gene-YGR117C_VR1 rna-NM_001181246.3_VR1 cds-NP_011632.3_VR1 99.5 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000016.1:18030-19463:- gene-YGR117C_ZTW1 rna-NM_001181246.3_ZTW1 cds-NP_011632.3_ZTW1 98.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:705487-706920:- gene-YGR117C_Sparadoxus rna-NM_001181246.3_Sparadoxus cds-NP_011632.3_Sparadoxus 86.2 100.0 Verified 1 1 1 False True False False False

Additional files