YGR079W (YGR079W)

Gene profile

Gene name: YGR079W
Reference locus (S288C): YGR079W
Gene biotype: protein_coding

Description: Putative uncharacterized protein ygr079w; Putative protein of unknown function; YGR079W is not an essential gene

Top 10 interactors (score): VTS1 (0.521); NOG2 (0.489); TRM11 (0.443)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:624408-625516:+ gene-YGR079W_AKU4011 rna-NM_001181208.1_AKU4011 cds-NP_011593.1_AKU4011 99.4 99.6 Unannotated 1 1 0 False False False True False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000173.1:60675-61787:+ gene-YGR079W_BG1 rna-NM_001181208.1_BG1 cds-NP_011593.1_BG1 99.9 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:626673-627785:+ gene-YGR079W_Bruggeman rna-NM_001181208.1_Bruggeman cds-NP_011593.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:625116-626224:+ gene-YGR079W_CAT1 rna-NM_001181208.1_CAT1 cds-NP_011593.1_CAT1 99.5 99.6 Unannotated 1 1 0 False False False True False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:625689-626797:+ gene-YGR079W_CBS1585 rna-NM_001181208.1_CBS1585 cds-NP_011593.1_CBS1585 99.4 99.6 Unannotated 1 1 0 False False False True False
CBS436 GCA_001738355.1 Sake Asia CM005349.1:627031-628143:+ gene-YGR079W_CBS436 rna-NM_001181208.1_CBS436 cds-NP_011593.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:618534-619642:+ gene-YGR079W_CBS6412 rna-NM_001181208.1_CBS6412 cds-NP_011593.1_CBS6412 99.4 99.6 Unannotated 1 1 0 False False False True False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:622335-623443:+ gene-YGR079W_CBS6413 rna-NM_001181208.1_CBS6413 cds-NP_011593.1_CBS6413 99.4 99.6 Unannotated 1 1 0 False False False True False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:640406-641518:+ gene-YGR079W_CENPK1137D rna-NM_001181208.1_CENPK1137D cds-NP_011593.1_CENPK1137D 99.7 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:612661-613769:+ gene-YGR079W_EthanolRed rna-NM_001181208.1_EthanolRed cds-NP_011593.1_EthanolRed 99.4 99.6 Unannotated 1 1 0 False False False True False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:616126-617234:+ gene-YGR079W_FaliES1 rna-NM_001181208.1_FaliES1 cds-NP_011593.1_FaliES1 99.4 99.6 Unannotated 1 1 0 False False False True False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000435.1:67065-68177:+ gene-YGR079W_JAY291 rna-NM_001181208.1_JAY291 cds-NP_011593.1_JAY291 99.9 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:623349-624461:+ gene-YGR079W_MUCL30387 rna-NM_001181208.1_MUCL30387 cds-NP_011593.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:626717-627829:+ gene-YGR079W_MUCL30388 rna-NM_001181208.1_MUCL30388 cds-NP_011593.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:621553-622661:+ gene-YGR079W_MUCL39482 rna-NM_001181208.1_MUCL39482 cds-NP_011593.1_MUCL39482 99.4 99.6 Unannotated 1 1 0 False False False True False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:631349-632461:+ gene-YGR079W_MUCL42920 rna-NM_001181208.1_MUCL42920 cds-NP_011593.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:640720-641832:+ gene-YGR079W_NCIM3186 rna-NM_001181208.1_NCIM3186 cds-NP_011593.1_NCIM3186 99.8 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:615729-616837:+ gene-YGR079W_NCYC1407 rna-NM_001181208.1_NCYC1407 cds-NP_011593.1_NCYC1407 99.4 99.6 Unannotated 1 1 0 False False False True False
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:618969-620081:+ gene-YGR079W_PE2H3 rna-NM_001181208.1_PE2H3 cds-NP_011593.1_PE2H3 99.9 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:624093-625201:+ gene-YGR079W_PE2H4 rna-NM_001181208.1_PE2H4 cds-NP_011593.1_PE2H4 99.4 99.6 Unannotated 1 1 0 False False False True False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:640720-641832:+ gene-YGR079W_S288C rna-NM_001181208.1_S288C cds-NP_011593.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000015.1:67293-68405:+ gene-YGR079W_SA1 rna-NM_001181208.1_SA1 cds-NP_011593.1_SA1 99.9 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:635437-636545:+ gene-YGR079W_ThermosaccDry rna-NM_001181208.1_ThermosaccDry cds-NP_011593.1_ThermosaccDry 99.4 99.6 Unannotated 1 1 0 False False False True False
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:732414-733526:+ gene-YGR079W_VR1 rna-NM_001181208.1_VR1 cds-NP_011593.1_VR1 99.9 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000015.1:90920-92028:+ gene-YGR079W_ZTW1 rna-NM_001181208.1_ZTW1 cds-NP_011593.1_ZTW1 99.4 99.6 Unannotated 1 1 0 False False False True False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:626009-627122:+ gene-YGR079W_Sparadoxus rna-NM_001181208.1_Sparadoxus cds-NP_011593.1_Sparadoxus 86.9 98.5 Unannotated 1 1 0 False False False True False

Additional files