Gene name: YGR054W
Reference locus (S288C): YGR054W
Gene biotype: protein_coding
Description: Eukaryotic initiation factor eIF2A; associates specifically with both 40S subunits and 80 S ribosomes, and interacts genetically with both eIF5b and eIF4E; homologous to mammalian eIF2A
Top 10 interactors (score): PRT1 (0.999); SUI2 (0.995); FUN12 (0.992); GCD11 (0.986); SUI3 (0.986); RPS11B (0.967); ASC1 (0.967); RPS11A (0.966); RPS19A (0.962); AIF1 (0.96); RPS6A (0.957); RPS6B (0.957); RPG1 (0.951); RPS4A (0.951); RPS30A (0.949); RPS19B (0.949); RPS30B (0.947); RPS8A (0.946); RPS13 (0.944); NIP1 (0.943)
Homologues (species, bitscore): EIF2A (Homo sapiens, 207.6); Eif2a (Mus musculus, 208.0); eif2a (Danio rerio, 241.9); eif2a (Xenopus tropicalis, 213.4); CG7414 (Drosophila melanogaster, 208.4); E04D5.1 (Caenorhabditis elegans, 223.4); AT1G73180 (Arabidopsis thaliana, 173.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:580379-582307:+ | gene-YGR054W_AKU4011 | rna-NM_001181183.4_AKU4011 | cds-NP_011568.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000173.1:16776-18704:+ | gene-YGR054W_BG1 | rna-NM_001181183.4_BG1 | cds-NP_011568.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:582673-584601:+ | gene-YGR054W_Bruggeman | rna-NM_001181183.4_Bruggeman | cds-NP_011568.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:581087-583015:+ | gene-YGR054W_CAT1 | rna-NM_001181183.4_CAT1 | cds-NP_011568.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:581693-583621:+ | gene-YGR054W_CBS1585 | rna-NM_001181183.4_CBS1585 | cds-NP_011568.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:582996-584924:+ | gene-YGR054W_CBS436 | rna-NM_001181183.4_CBS436 | cds-NP_011568.3_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:574488-576416:+ | gene-YGR054W_CBS6412 | rna-NM_001181183.4_CBS6412 | cds-NP_011568.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:578490-580418:+ | gene-YGR054W_CBS6413 | rna-NM_001181183.4_CBS6413 | cds-NP_011568.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:596410-598338:+ | gene-YGR054W_CENPK1137D | rna-NM_001181183.4_CENPK1137D | cds-NP_011568.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:568621-570549:+ | gene-YGR054W_EthanolRed | rna-NM_001181183.4_EthanolRed | cds-NP_011568.3_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:572105-574033:+ | gene-YGR054W_FaliES1 | rna-NM_001181183.4_FaliES1 | cds-NP_011568.3_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000435.1:23058-24986:+ | gene-YGR054W_JAY291 | rna-NM_001181183.4_JAY291 | cds-NP_011568.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:579308-581236:+ | gene-YGR054W_MUCL30387 | rna-NM_001181183.4_MUCL30387 | cds-NP_011568.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:582702-584630:+ | gene-YGR054W_MUCL30388 | rna-NM_001181183.4_MUCL30388 | cds-NP_011568.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:577510-579438:+ | gene-YGR054W_MUCL39482 | rna-NM_001181183.4_MUCL39482 | cds-NP_011568.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:587331-589259:+ | gene-YGR054W_MUCL42920 | rna-NM_001181183.4_MUCL42920 | cds-NP_011568.3_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:596693-598621:+ | gene-YGR054W_NCIM3186 | rna-NM_001181183.4_NCIM3186 | cds-NP_011568.3_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:571708-573636:+ | gene-YGR054W_NCYC1407 | rna-NM_001181183.4_NCYC1407 | cds-NP_011568.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:574959-576887:+ | gene-YGR054W_PE2H3 | rna-NM_001181183.4_PE2H3 | cds-NP_011568.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:580066-581994:+ | gene-YGR054W_PE2H4 | rna-NM_001181183.4_PE2H4 | cds-NP_011568.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:596693-598621:+ | gene-YGR054W_S288C | rna-NM_001181183.4_S288C | cds-NP_011568.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000015.1:23146-25074:+ | gene-YGR054W_SA1 | rna-NM_001181183.4_SA1 | cds-NP_011568.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:591442-593370:+ | gene-YGR054W_ThermosaccDry | rna-NM_001181183.4_ThermosaccDry | cds-NP_011568.3_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:688368-690296:+ | gene-YGR054W_VR1 | rna-NM_001181183.4_VR1 | cds-NP_011568.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000015.1:46918-48846:+ | gene-YGR054W_ZTW1 | rna-NM_001181183.4_ZTW1 | cds-NP_011568.3_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:581938-583866:+ | gene-YGR054W_Sparadoxus | rna-NM_001181183.4_Sparadoxus | cds-NP_011568.3_Sparadoxus | 91.7 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |