YGR050C (YGR050C)

Gene profile

Gene name: YGR050C
Reference locus (S288C): YGR050C
Gene biotype: protein_coding

Description: Uncharacterized protein YGR050C; Protein of unknown function; mRNA identified as translated by ribosome profiling data

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:575786-576142:- gene-YGR050C_AKU4011 rna-NM_001270748.1_AKU4011 cds-NP_001257677.1_AKU4011 98.8 100.0 Unannotated 1 1 0 False False False False True
BG1 GCA_001932575.1 Bioethanol South America MSHP01000173.1:12181-12537:- gene-YGR050C_BG1 rna-NM_001270748.1_BG1 cds-NP_001257677.1_BG1 98.3 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:578079-578435:- gene-YGR050C_Bruggeman rna-NM_001270748.1_Bruggeman cds-NP_001257677.1_Bruggeman 98.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:576485-576841:- gene-YGR050C_CAT1 rna-NM_001270748.1_CAT1 cds-NP_001257677.1_CAT1 98.5 100.0 Unannotated 1 1 0 False False False False True
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:577099-577455:- gene-YGR050C_CBS1585 rna-NM_001270748.1_CBS1585 cds-NP_001257677.1_CBS1585 98.8 100.0 Unannotated 1 1 0 False False False False True
CBS436 GCA_001738355.1 Sake Asia CM005349.1:578395-578751:- gene-YGR050C_CBS436 rna-NM_001270748.1_CBS436 cds-NP_001257677.1_CBS436 99.1 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:569895-570251:- gene-YGR050C_CBS6412 rna-NM_001270748.1_CBS6412 cds-NP_001257677.1_CBS6412 98.8 100.0 Unannotated 1 1 0 False False False False True
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:573895-574251:- gene-YGR050C_CBS6413 rna-NM_001270748.1_CBS6413 cds-NP_001257677.1_CBS6413 98.8 100.0 Unannotated 1 1 0 False False False False True
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:591803-592159:- gene-YGR050C_CENPK1137D rna-NM_001270748.1_CENPK1137D cds-NP_001257677.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:564027-564383:- gene-YGR050C_EthanolRed rna-NM_001270748.1_EthanolRed cds-NP_001257677.1_EthanolRed 98.5 100.0 Unannotated 1 1 0 False False False False True
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:567511-567867:- gene-YGR050C_FaliES1 rna-NM_001270748.1_FaliES1 cds-NP_001257677.1_FaliES1 98.5 100.0 Unannotated 1 1 0 False False False False True
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000435.1:18480-18836:- gene-YGR050C_JAY291 rna-NM_001270748.1_JAY291 cds-NP_001257677.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:574712-575068:- gene-YGR050C_MUCL30387 rna-NM_001270748.1_MUCL30387 cds-NP_001257677.1_MUCL30387 98.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:578108-578464:- gene-YGR050C_MUCL30388 rna-NM_001270748.1_MUCL30388 cds-NP_001257677.1_MUCL30388 98.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:572917-573273:- gene-YGR050C_MUCL39482 rna-NM_001270748.1_MUCL39482 cds-NP_001257677.1_MUCL39482 98.8 100.0 Unannotated 1 1 0 False False False False True
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:582730-583086:- gene-YGR050C_MUCL42920 rna-NM_001270748.1_MUCL42920 cds-NP_001257677.1_MUCL42920 99.1 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:592086-592442:- gene-YGR050C_NCIM3186 rna-NM_001270748.1_NCIM3186 cds-NP_001257677.1_NCIM3186 98.5 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:567112-567468:- gene-YGR050C_NCYC1407 rna-NM_001270748.1_NCYC1407 cds-NP_001257677.1_NCYC1407 98.8 100.0 Unannotated 1 1 0 False False False False True
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:570381-570737:- gene-YGR050C_PE2H3 rna-NM_001270748.1_PE2H3 cds-NP_001257677.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:575488-575844:- gene-YGR050C_PE2H4 rna-NM_001270748.1_PE2H4 cds-NP_001257677.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:592086-592442:- gene-YGR050C_S288C rna-NM_001270748.1_S288C cds-NP_001257677.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000015.1:18539-18895:- gene-YGR050C_SA1 rna-NM_001270748.1_SA1 cds-NP_001257677.1_SA1 98.0 100.0 Unannotated 1 1 0 False False False False True
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:586848-587204:- gene-YGR050C_ThermosaccDry rna-NM_001270748.1_ThermosaccDry cds-NP_001257677.1_ThermosaccDry 98.5 100.0 Unannotated 1 1 0 False False False False True
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:683761-684117:- gene-YGR050C_VR1 rna-NM_001270748.1_VR1 cds-NP_001257677.1_VR1 98.0 100.0 Unannotated 1 1 0 False False False False True
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000015.1:42326-42682:- gene-YGR050C_ZTW1 rna-NM_001270748.1_ZTW1 cds-NP_001257677.1_ZTW1 98.3 100.0 Unannotated 1 1 0 False False False False True
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:577299-577656:- gene-YGR050C_Sparadoxus rna-NM_001270748.1_Sparadoxus cds-NP_001257677.1_Sparadoxus 81.9 98.0 Unannotated 1 1 0 False False False True False

Additional files