YGR039W (YGR039W)

Gene profile

Gene name: YGR039W
Reference locus (S288C): YGR039W
Gene biotype: protein_coding

Description: Uncharacterized protein YGR039W; Putative protein of unknown function; conserved among S. cerevisiae strains; YGR039W is not an essential gene

Top 10 interactors (score): NUP57 (0.744); AGC1 (0.678); RPL43B (0.45)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:558606-558917:+ gene-YGR039W_AKU4011 rna-NM_001348840.1_AKU4011 cds-NP_001335781.1_AKU4011 99.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000060.1:16941-17252:- gene-YGR039W_BG1 rna-NM_001348840.1_BG1 cds-NP_001335781.1_BG1 99.6 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:560880-561191:+ gene-YGR039W_Bruggeman rna-NM_001348840.1_Bruggeman cds-NP_001335781.1_Bruggeman 99.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:559284-559595:+ gene-YGR039W_CAT1 rna-NM_001348840.1_CAT1 cds-NP_001335781.1_CAT1 99.3 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:559918-560229:+ gene-YGR039W_CBS1585 rna-NM_001348840.1_CBS1585 cds-NP_001335781.1_CBS1585 99.3 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005349.1:561206-561517:+ gene-YGR039W_CBS436 rna-NM_001348840.1_CBS436 cds-NP_001335781.1_CBS436 99.0 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:552693-553004:+ gene-YGR039W_CBS6412 rna-NM_001348840.1_CBS6412 cds-NP_001335781.1_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:556693-557004:+ gene-YGR039W_CBS6413 rna-NM_001348840.1_CBS6413 cds-NP_001335781.1_CBS6413 99.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:574727-575038:+ gene-YGR039W_CENPK1137D rna-NM_001348840.1_CENPK1137D cds-NP_001335781.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:546821-547132:+ gene-YGR039W_EthanolRed rna-NM_001348840.1_EthanolRed cds-NP_001335781.1_EthanolRed 99.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:550305-550616:+ gene-YGR039W_FaliES1 rna-NM_001348840.1_FaliES1 cds-NP_001335781.1_FaliES1 99.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000435.1:1281-1592:+ gene-YGR039W_JAY291 rna-NM_001348840.1_JAY291 cds-NP_001335781.1_JAY291 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:557512-557823:+ gene-YGR039W_MUCL30387 rna-NM_001348840.1_MUCL30387 cds-NP_001335781.1_MUCL30387 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:560127-560438:+ gene-YGR039W_MUCL30388 rna-NM_001348840.1_MUCL30388 cds-NP_001335781.1_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:555737-556048:+ gene-YGR039W_MUCL39482 rna-NM_001348840.1_MUCL39482 cds-NP_001335781.1_MUCL39482 99.3 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:565530-565841:+ gene-YGR039W_MUCL42920 rna-NM_001348840.1_MUCL42920 cds-NP_001335781.1_MUCL42920 99.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:574888-575199:+ gene-YGR039W_NCIM3186 rna-NM_001348840.1_NCIM3186 cds-NP_001335781.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:549932-550243:+ gene-YGR039W_NCYC1407 rna-NM_001348840.1_NCYC1407 cds-NP_001335781.1_NCYC1407 99.6 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:553183-553494:+ gene-YGR039W_PE2H3 rna-NM_001348840.1_PE2H3 cds-NP_001335781.1_PE2H3 99.3 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:558290-558601:+ gene-YGR039W_PE2H4 rna-NM_001348840.1_PE2H4 cds-NP_001335781.1_PE2H4 99.3 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:574888-575199:+ gene-YGR039W_S288C rna-NM_001348840.1_S288C cds-NP_001335781.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000015.1:1340-1651:+ gene-YGR039W_SA1 rna-NM_001348840.1_SA1 cds-NP_001335781.1_SA1 99.0 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:569642-569953:+ gene-YGR039W_ThermosaccDry rna-NM_001348840.1_ThermosaccDry cds-NP_001335781.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:666562-666873:+ gene-YGR039W_VR1 rna-NM_001348840.1_VR1 cds-NP_001335781.1_VR1 99.0 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000015.1:25126-25437:+ gene-YGR039W_ZTW1 rna-NM_001348840.1_ZTW1 cds-NP_001335781.1_ZTW1 99.6 100.0 Verified 1 1 1 False True False False False

Additional files