Gene name: YGR038C-B
Reference locus (S288C): YGR038C-B
Gene biotype: protein_coding
Description: Transposon Ty1-GR2 Gag-Pol polyprotein; Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes
Top 10 interactors (score): Unknown
Homologues (species, bitscore): CRK8 (Arabidopsis thaliana, 93.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CAT1 | GCA_001738705.1 | Bioethanol | South America | MBWC01000254.1:1-889:- | gene-YGR038C-B_CAT1 | rna-NM_001184434.2_CAT1 | cds-NP_058160.1_CAT1 | 16.8 | 16.8 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | MBVW01000013.1:1-696:- | gene-YGR038C-B_MUCL30388 | rna-NM_001184434.2_MUCL30388 | cds-NP_058160.1_MUCL30388 | 13.2 | 13.2 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:562199-567467:- | gene-YGR038C-B_S288C | rna-NM_001184434.2_S288C | cds-NP_058160.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |