YGR035C (YGR035C)


Gene profile

Gene name: YGR035C
Reference locus (S288C): YGR035C
Gene biotype: protein_coding

Description: Uncharacterized protein YGR035C; Putative protein of unknown function, potential Cdc28p substrate; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance; YGR035C has a paralog, YLR346C, that arose from the whole genome duplication

Top 10 interactors (score): YML012C-A (0.816); YOR338W (0.779); VID27 (0.755); YJL055W (0.75); YMC2 (0.712); IPK1 (0.711); ICT1 (0.62); VIP1 (0.619); AQR1 (0.585); DAK2 (0.573); PDR16 (0.565); DLD3 (0.564); ADE8 (0.522); ANB1 (0.499); ADE6 (0.499); ADE5,7 (0.497); GRE2 (0.454); DIP5 (0.452); CDC28 (0.447); DID4 (0.44)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:552674-553024:- gene-YGR035C_AKU4011 rna-NM_001181164.1_AKU4011 cds-NP_011549.1_AKU4011 100.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000060.1:22828-23178:+ gene-YGR035C_BG1 rna-NM_001181164.1_BG1 cds-NP_011549.1_BG1 99.4 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:554950-555300:- gene-YGR035C_Bruggeman rna-NM_001181164.1_Bruggeman cds-NP_011549.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:553009-553359:- gene-YGR035C_CAT1 rna-NM_001181164.1_CAT1 cds-NP_011549.1_CAT1 99.4 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:553986-554336:- gene-YGR035C_CBS1585 rna-NM_001181164.1_CBS1585 cds-NP_011549.1_CBS1585 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005349.1:548792-549142:- gene-YGR035C_CBS436 rna-NM_001181164.1_CBS436 cds-NP_011549.1_CBS436 99.7 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:546764-547114:- gene-YGR035C_CBS6412 rna-NM_001181164.1_CBS6412 cds-NP_011549.1_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:550762-551112:- gene-YGR035C_CBS6413 rna-NM_001181164.1_CBS6413 cds-NP_011549.1_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:556898-557248:- gene-YGR035C_CENPK1137D rna-NM_001181164.1_CENPK1137D cds-NP_011549.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:540893-541243:- gene-YGR035C_EthanolRed rna-NM_001181164.1_EthanolRed cds-NP_011549.1_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:544378-544728:- gene-YGR035C_FaliES1 rna-NM_001181164.1_FaliES1 cds-NP_011549.1_FaliES1 100.0 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000020.1:83082-83432:- gene-YGR035C_JAY291 rna-NM_001181164.1_JAY291 cds-NP_011549.1_JAY291 99.7 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:551583-551933:- gene-YGR035C_MUCL30387 rna-NM_001181164.1_MUCL30387 cds-NP_011549.1_MUCL30387 99.7 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:554199-554549:- gene-YGR035C_MUCL30388 rna-NM_001181164.1_MUCL30388 cds-NP_011549.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:549808-550158:- gene-YGR035C_MUCL39482 rna-NM_001181164.1_MUCL39482 cds-NP_011549.1_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:559602-559952:- gene-YGR035C_MUCL42920 rna-NM_001181164.1_MUCL42920 cds-NP_011549.1_MUCL42920 99.7 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:557072-557422:- gene-YGR035C_NCIM3186 rna-NM_001181164.1_NCIM3186 cds-NP_011549.1_NCIM3186 99.7 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:544001-544351:- gene-YGR035C_NCYC1407 rna-NM_001181164.1_NCYC1407 cds-NP_011549.1_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:546907-547257:- gene-YGR035C_PE2H3 rna-NM_001181164.1_PE2H3 cds-NP_011549.1_PE2H3 99.7 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:552014-552364:- gene-YGR035C_PE2H4 rna-NM_001181164.1_PE2H4 cds-NP_011549.1_PE2H4 99.7 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:557072-557422:- gene-YGR035C_S288C rna-NM_001181164.1_S288C cds-NP_011549.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000021.1:4514-4864:+ gene-YGR035C_SA1 rna-NM_001181164.1_SA1 cds-NP_011549.1_SA1 99.4 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:563714-564064:- gene-YGR035C_ThermosaccDry rna-NM_001181164.1_ThermosaccDry cds-NP_011549.1_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:654138-654488:- gene-YGR035C_VR1 rna-NM_001181164.1_VR1 cds-NP_011549.1_VR1 99.4 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000015.1:19197-19547:- gene-YGR035C_ZTW1 rna-NM_001181164.1_ZTW1 cds-NP_011549.1_ZTW1 99.4 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:553250-553606:- gene-YGR035C_Sparadoxus rna-NM_001181164.1_Sparadoxus cds-NP_011549.1_Sparadoxus 84.6 99.7 Verified 1 1 1 False True False False False

Additional files