Gene name: YGR017W
Reference locus (S288C): YGR017W
Gene biotype: protein_coding
Description: Pyridoxamine 5'-phosphate oxidase; Uncharacterized protein YGR017W; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to both the nucleus and the cytoplasm
Top 10 interactors (score): YPR127W (0.901); BUD17 (0.9); BUD16 (0.9); RTC3 (0.896); MSC1 (0.896); ATP10 (0.888); PDX3 (0.802); THI11 (0.8); THI12 (0.8); THI5 (0.8); THI13 (0.8); YER084W (0.749); RRT5 (0.748); BSC6 (0.747); YLR257W (0.746); YMR295C (0.736); RNH203 (0.691); IES5 (0.679); CIP1 (0.651); SNZ1 (0.65)
Homologues (species, bitscore): AT2G46580 (Arabidopsis thaliana, 61.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:525631-526524:+ | gene-YGR017W_AKU4011 | rna-NM_001181146.1_AKU4011 | cds-NP_011531.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000060.1:49385-50278:- | gene-YGR017W_BG1 | rna-NM_001181146.1_BG1 | cds-NP_011531.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:526813-527706:+ | gene-YGR017W_Bruggeman | rna-NM_001181146.1_Bruggeman | cds-NP_011531.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:525593-526486:+ | gene-YGR017W_CAT1 | rna-NM_001181146.1_CAT1 | cds-NP_011531.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:526950-527843:+ | gene-YGR017W_CBS1585 | rna-NM_001181146.1_CBS1585 | cds-NP_011531.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:521696-522589:+ | gene-YGR017W_CBS436 | rna-NM_001181146.1_CBS436 | cds-NP_011531.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:519721-520614:+ | gene-YGR017W_CBS6412 | rna-NM_001181146.1_CBS6412 | cds-NP_011531.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:523800-524693:+ | gene-YGR017W_CBS6413 | rna-NM_001181146.1_CBS6413 | cds-NP_011531.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:523605-524498:+ | gene-YGR017W_CENPK1137D | rna-NM_001181146.1_CENPK1137D | cds-NP_011531.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:513823-514716:+ | gene-YGR017W_EthanolRed | rna-NM_001181146.1_EthanolRed | cds-NP_011531.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:517073-517966:+ | gene-YGR017W_FaliES1 | rna-NM_001181146.1_FaliES1 | cds-NP_011531.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000020.1:55983-56876:+ | gene-YGR017W_JAY291 | rna-NM_001181146.1_JAY291 | cds-NP_011531.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:524040-524933:+ | gene-YGR017W_MUCL30387 | rna-NM_001181146.1_MUCL30387 | cds-NP_011531.1_MUCL30387 | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:526582-527475:+ | gene-YGR017W_MUCL30388 | rna-NM_001181146.1_MUCL30388 | cds-NP_011531.1_MUCL30388 | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:522778-523671:+ | gene-YGR017W_MUCL39482 | rna-NM_001181146.1_MUCL39482 | cds-NP_011531.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:532523-533416:+ | gene-YGR017W_MUCL42920 | rna-NM_001181146.1_MUCL42920 | cds-NP_011531.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:523787-524680:+ | gene-YGR017W_NCIM3186 | rna-NM_001181146.1_NCIM3186 | cds-NP_011531.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:516961-517854:+ | gene-YGR017W_NCYC1407 | rna-NM_001181146.1_NCYC1407 | cds-NP_011531.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:519854-520747:+ | gene-YGR017W_PE2H3 | rna-NM_001181146.1_PE2H3 | cds-NP_011531.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:524904-525797:+ | gene-YGR017W_PE2H4 | rna-NM_001181146.1_PE2H4 | cds-NP_011531.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:523787-524680:+ | gene-YGR017W_S288C | rna-NM_001181146.1_S288C | cds-NP_011531.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000021.1:31022-31915:- | gene-YGR017W_SA1 | rna-NM_001181146.1_SA1 | cds-NP_011531.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:536399-537292:+ | gene-YGR017W_ThermosaccDry | rna-NM_001181146.1_ThermosaccDry | cds-NP_011531.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:627072-627965:+ | gene-YGR017W_VR1 | rna-NM_001181146.1_VR1 | cds-NP_011531.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:515325-516218:+ | gene-YGR017W_ZTW1 | rna-NM_001181146.1_ZTW1 | cds-NP_011531.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:524727-525614:+ | gene-YGR017W_Sparadoxus | rna-NM_001181146.1_Sparadoxus | cds-NP_011531.1_Sparadoxus | 92.7 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |