Gene name: YGL260W
Reference locus (S288C): YGL260W
Gene biotype: protein_coding
Description: Putative protein of unknown function; transcription is significantly increased in a NAP1 deletion background; deletion mutant has increased accumulation of nickel and selenium; Belongs to the UPF0377 family
Top 10 interactors (score): OPI8 (0.814); YIR040C (0.787); YHL005C (0.78); PAU11 (0.759); INA22 (0.744); SOV1 (0.716); YKL075C (0.712); OCA5 (0.712); ATP25 (0.712); YHR033W (0.711); YGR122W (0.696); COS12 (0.693); MNT2 (0.67); YIL174W (0.609); YKL223W (0.609); YIL175W (0.608); MVB12 (0.571); YGL258W-A (0.569); YDR220C (0.568); YGL262W (0.568)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:432525-432756:- | gene-YGL260W_AKU4011 | rna-NM_001181126.1_AKU4011 | cds-NP_011254.1_AKU4011 | 96.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000037.1:719-949:- | gene-YGL260W_BG1 | rna-NM_001181126.1_BG1 | cds-NP_011254.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:8148-8378:+ | gene-YGL260W_Bruggeman | rna-NM_001181126.1_Bruggeman | cds-NP_011254.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:422890-423121:- | gene-YGL260W_CAT1 | rna-NM_001181126.1_CAT1 | cds-NP_011254.1_CAT1 | 98.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:432930-433161:- | gene-YGL260W_CBS1585 | rna-NM_001181126.1_CBS1585 | cds-NP_011254.1_CBS1585 | 96.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:6882-7112:+ | gene-YGL260W_CBS436 | rna-NM_001181126.1_CBS436 | cds-NP_011254.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005327.1:131157-131388:- | gene-YGL260W_CBS6412 | rna-NM_001181126.1_CBS6412 | cds-NP_011254.1_CBS6412 | 96.9 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:423754-423985:- | gene-YGL260W_CBS6413 | rna-NM_001181126.1_CBS6413 | cds-NP_011254.1_CBS6413 | 96.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:6702-6932:+ | gene-YGL260W_CENPK1137D | rna-NM_001181126.1_CENPK1137D | cds-NP_011254.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:1291-1521:+ | gene-YGL260W_EthanolRed | rna-NM_001181126.1_EthanolRed | cds-NP_011254.1_EthanolRed | 95.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:381-611:+ | gene-YGL260W_FaliES1 | rna-NM_001181126.1_FaliES1 | cds-NP_011254.1_FaliES1 | 95.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000208.1:1-139:+ | gene-YGL260W_JAY291 | rna-NM_001181126.1_JAY291 | cds-NP_011254.1_JAY291 | 52.7 | 58.4 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:8332-8562:+ | gene-YGL260W_MUCL30387 | rna-NM_001181126.1_MUCL30387 | cds-NP_011254.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:10242-10472:+ | gene-YGL260W_MUCL30388 | rna-NM_001181126.1_MUCL30388 | cds-NP_011254.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:432803-433034:- | gene-YGL260W_MUCL39482 | rna-NM_001181126.1_MUCL39482 | cds-NP_011254.1_MUCL39482 | 96.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:439395-439625:- | gene-YGL260W_MUCL42920 | rna-NM_001181126.1_MUCL42920 | cds-NP_011254.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:6860-7090:+ | gene-YGL260W_NCIM3186 | rna-NM_001181126.1_NCIM3186 | cds-NP_011254.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:858-1089:+ | gene-YGL260W_NCYC1407 | rna-NM_001181126.1_NCYC1407 | cds-NP_011254.1_NCYC1407 | 96.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994140.1:203081-203311:- | gene-YGL260W_PE2H3 | rna-NM_001181126.1_PE2H3 | cds-NP_011254.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999872.1:2513-2743:+ | gene-YGL260W_PE2H4 | rna-NM_001181126.1_PE2H4 | cds-NP_011254.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:6860-7090:+ | gene-YGL260W_S288C | rna-NM_001181126.1_S288C | cds-NP_011254.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000134.1:5051-5281:- | gene-YGL260W_SA1 | rna-NM_001181126.1_SA1 | cds-NP_011254.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:431619-431850:- | gene-YGL260W_ThermosaccDry | rna-NM_001181126.1_ThermosaccDry | cds-NP_011254.1_ThermosaccDry | 96.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:428759-428990:- | gene-YGL260W_VR1 | rna-NM_001181126.1_VR1 | cds-NP_011254.1_VR1 | 98.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000020.1:40597-40828:- | gene-YGL260W_ZTW1 | rna-NM_001181126.1_ZTW1 | cds-NP_011254.1_ZTW1 | 97.8 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |