Gene name: YGL185C
Reference locus (S288C): YGL185C
Gene biotype: protein_coding
Description: Putative 2-hydroxyacid dehydrogenase ygl185c; Putative protein with sequence similar to hydroxyacid dehydrogenases; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm
Top 10 interactors (score): AGX1 (0.617); PHO13 (0.558); TDA10 (0.534)
Homologues (species, bitscore): PHGDH (Homo sapiens, 71.6); Phgdh (Mus musculus, 70.1); zgc:136493 (Danio rerio, 70.5); phgdh (Xenopus tropicalis, 70.9); CG1236 (Drosophila melanogaster, 77.8); C31C9.2 (Caenorhabditis elegans, 71.6); HPR3 (Arabidopsis thaliana, 102.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:155708-156847:- | gene-YGL185C_AKU4011 | rna-NM_001181050.1_AKU4011 | cds-NP_011330.1_AKU4011 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:253602-254741:+ | gene-YGL185C_BG1 | rna-NM_001181050.1_BG1 | cds-NP_011330.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:157939-159078:- | gene-YGL185C_Bruggeman | rna-NM_001181050.1_Bruggeman | cds-NP_011330.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:153801-154940:- | gene-YGL185C_CAT1 | rna-NM_001181050.1_CAT1 | cds-NP_011330.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:158847-159986:- | gene-YGL185C_CBS1585 | rna-NM_001181050.1_CBS1585 | cds-NP_011330.1_CBS1585 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:153820-154959:- | gene-YGL185C_CBS436 | rna-NM_001181050.1_CBS436 | cds-NP_011330.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:145625-146764:- | gene-YGL185C_CBS6412 | rna-NM_001181050.1_CBS6412 | cds-NP_011330.1_CBS6412 | 98.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:153160-154299:- | gene-YGL185C_CBS6413 | rna-NM_001181050.1_CBS6413 | cds-NP_011330.1_CBS6413 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:153360-154499:- | gene-YGL185C_CENPK1137D | rna-NM_001181050.1_CENPK1137D | cds-NP_011330.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:145695-146834:- | gene-YGL185C_EthanolRed | rna-NM_001181050.1_EthanolRed | cds-NP_011330.1_EthanolRed | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:146695-147834:- | gene-YGL185C_FaliES1 | rna-NM_001181050.1_FaliES1 | cds-NP_011330.1_FaliES1 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000397.1:72010-73149:- | gene-YGL185C_JAY291 | rna-NM_001181050.1_JAY291 | cds-NP_011330.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:155175-156314:- | gene-YGL185C_MUCL30387 | rna-NM_001181050.1_MUCL30387 | cds-NP_011330.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:158276-159415:- | gene-YGL185C_MUCL30388 | rna-NM_001181050.1_MUCL30388 | cds-NP_011330.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:155857-156996:- | gene-YGL185C_MUCL39482 | rna-NM_001181050.1_MUCL39482 | cds-NP_011330.1_MUCL39482 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:158482-159621:- | gene-YGL185C_MUCL42920 | rna-NM_001181050.1_MUCL42920 | cds-NP_011330.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:153167-154306:- | gene-YGL185C_NCIM3186 | rna-NM_001181050.1_NCIM3186 | cds-NP_011330.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:147338-148477:- | gene-YGL185C_NCYC1407 | rna-NM_001181050.1_NCYC1407 | cds-NP_011330.1_NCYC1407 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:149322-150461:- | gene-YGL185C_PE2H3 | rna-NM_001181050.1_PE2H3 | cds-NP_011330.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:148870-150009:- | gene-YGL185C_PE2H4 | rna-NM_001181050.1_PE2H4 | cds-NP_011330.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:153167-154306:- | gene-YGL185C_S288C | rna-NM_001181050.1_S288C | cds-NP_011330.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000067.1:12923-14062:- | gene-YGL185C_SA1 | rna-NM_001181050.1_SA1 | cds-NP_011330.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:146957-148096:- | gene-YGL185C_ThermosaccDry | rna-NM_001181050.1_ThermosaccDry | cds-NP_011330.1_ThermosaccDry | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:154226-155365:- | gene-YGL185C_VR1 | rna-NM_001181050.1_VR1 | cds-NP_011330.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:145490-146629:- | gene-YGL185C_ZTW1 | rna-NM_001181050.1_ZTW1 | cds-NP_011330.1_ZTW1 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:152334-153473:- | gene-YGL185C_Sparadoxus | rna-NM_001181050.1_Sparadoxus | cds-NP_011330.1_Sparadoxus | 88.7 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |