Gene name: YGL140C
Reference locus (S288C): YGL140C
Gene biotype: protein_coding
Description: Uncharacterized membrane protein YGL140C; Putative protein of unknown function; non-essential gene; contains multiple predicted transmembrane domains
Top 10 interactors (score): FLC3 (0.929); RRT6 (0.919); YDL183C (0.868); SWM2 (0.777); GPI10 (0.773); HUL5 (0.769); PXR1 (0.746); ROG1 (0.718); PHO91 (0.717); ARO2 (0.697); SEC20 (0.691); NRM1 (0.657); ERV29 (0.654); RPL9A (0.568); LRO1 (0.568); LST8 (0.52); DTR1 (0.495); SBA1 (0.463); ATG3 (0.45)
Homologues (species, bitscore): AT1G68600 (Arabidopsis thaliana, 52.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:243940-247599:- | gene-YGL140C_AKU4011 | rna-NM_001181005.1_AKU4011 | cds-NP_011375.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:157352-161011:+ | gene-YGL140C_BG1 | rna-NM_001181005.1_BG1 | cds-NP_011375.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:246365-250024:- | gene-YGL140C_Bruggeman | rna-NM_001181005.1_Bruggeman | cds-NP_011375.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:241956-245615:- | gene-YGL140C_CAT1 | rna-NM_001181005.1_CAT1 | cds-NP_011375.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:247322-250981:- | gene-YGL140C_CBS1585 | rna-NM_001181005.1_CBS1585 | cds-NP_011375.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:241914-245573:- | gene-YGL140C_CBS436 | rna-NM_001181005.1_CBS436 | cds-NP_011375.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:233532-237191:- | gene-YGL140C_CBS6412 | rna-NM_001181005.1_CBS6412 | cds-NP_011375.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:241878-245537:- | gene-YGL140C_CBS6413 | rna-NM_001181005.1_CBS6413 | cds-NP_011375.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:241615-245274:- | gene-YGL140C_CENPK1137D | rna-NM_001181005.1_CENPK1137D | cds-NP_011375.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:234087-237746:- | gene-YGL140C_EthanolRed | rna-NM_001181005.1_EthanolRed | cds-NP_011375.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:235333-238992:- | gene-YGL140C_FaliES1 | rna-NM_001181005.1_FaliES1 | cds-NP_011375.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000090.1:85156-88816:- | gene-YGL140C_JAY291 | rna-NM_001181005.1_JAY291 | cds-NP_011375.1_JAY291 | 99.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:243335-246994:- | gene-YGL140C_MUCL30387 | rna-NM_001181005.1_MUCL30387 | cds-NP_011375.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:246450-250109:- | gene-YGL140C_MUCL30388 | rna-NM_001181005.1_MUCL30388 | cds-NP_011375.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:244103-247762:- | gene-YGL140C_MUCL39482 | rna-NM_001181005.1_MUCL39482 | cds-NP_011375.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:247324-250983:- | gene-YGL140C_MUCL42920 | rna-NM_001181005.1_MUCL42920 | cds-NP_011375.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:241353-245012:- | gene-YGL140C_NCIM3186 | rna-NM_001181005.1_NCIM3186 | cds-NP_011375.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:235593-239252:- | gene-YGL140C_NCYC1407 | rna-NM_001181005.1_NCYC1407 | cds-NP_011375.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:237459-241118:- | gene-YGL140C_PE2H3 | rna-NM_001181005.1_PE2H3 | cds-NP_011375.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:242454-246113:- | gene-YGL140C_PE2H4 | rna-NM_001181005.1_PE2H4 | cds-NP_011375.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:241353-245012:- | gene-YGL140C_S288C | rna-NM_001181005.1_S288C | cds-NP_011375.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000081.1:9737-13396:+ | gene-YGL140C_SA1 | rna-NM_001181005.1_SA1 | cds-NP_011375.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:235562-239221:- | gene-YGL140C_ThermosaccDry | rna-NM_001181005.1_ThermosaccDry | cds-NP_011375.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:242373-246032:- | gene-YGL140C_VR1 | rna-NM_001181005.1_VR1 | cds-NP_011375.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:233663-237322:- | gene-YGL140C_ZTW1 | rna-NM_001181005.1_ZTW1 | cds-NP_011375.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:239710-243366:- | gene-YGL140C_Sparadoxus | rna-NM_001181005.1_Sparadoxus | cds-NP_011375.1_Sparadoxus | 90.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |