YGL138C (YGL138C)


Gene profile

Gene name: YGL138C
Reference locus (S288C): YGL138C
Gene biotype: protein_coding

Description: Uncharacterized protein YGL138C; Putative protein of unknown function; has no significant sequence similarity to any known protein

Top 10 interactors (score): RRT5 (0.78); CDA1 (0.756); LOH1 (0.749); BNA1 (0.748); GPI10 (0.744); CDA2 (0.743); MRM2 (0.712); ITC1 (0.695); ROG1 (0.677); SUM1 (0.634); PCL10 (0.614); RPS21B (0.591); YCL049C (0.586); RPL31B (0.561); ROT1 (0.552); HXT14 (0.542); RPL27B (0.499); YFL064C (0.497); PLB1 (0.465); YML133C (0.45)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:251057-252094:- gene-YGL138C_AKU4011 rna-NM_001181003.1_AKU4011 cds-NP_011377.1_AKU4011 99.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000132.1:152833-153870:+ gene-YGL138C_BG1 rna-NM_001181003.1_BG1 cds-NP_011377.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:253509-254546:- gene-YGL138C_Bruggeman rna-NM_001181003.1_Bruggeman cds-NP_011377.1_Bruggeman 99.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:249097-250134:- gene-YGL138C_CAT1 rna-NM_001181003.1_CAT1 cds-NP_011377.1_CAT1 99.7 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:254439-255476:- gene-YGL138C_CBS1585 rna-NM_001181003.1_CBS1585 cds-NP_011377.1_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005349.1:249049-250086:- gene-YGL138C_CBS436 rna-NM_001181003.1_CBS436 cds-NP_011377.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:240649-241686:- gene-YGL138C_CBS6412 rna-NM_001181003.1_CBS6412 cds-NP_011377.1_CBS6412 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:248995-250032:- gene-YGL138C_CBS6413 rna-NM_001181003.1_CBS6413 cds-NP_011377.1_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:248753-249790:- gene-YGL138C_CENPK1137D rna-NM_001181003.1_CENPK1137D cds-NP_011377.1_CENPK1137D 99.9 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:241229-242266:- gene-YGL138C_EthanolRed rna-NM_001181003.1_EthanolRed cds-NP_011377.1_EthanolRed 99.4 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:242475-243512:- gene-YGL138C_FaliES1 rna-NM_001181003.1_FaliES1 cds-NP_011377.1_FaliES1 99.4 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000090.1:92301-93338:- gene-YGL138C_JAY291 rna-NM_001181003.1_JAY291 cds-NP_011377.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:250479-251516:- gene-YGL138C_MUCL30387 rna-NM_001181003.1_MUCL30387 cds-NP_011377.1_MUCL30387 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:253597-254634:- gene-YGL138C_MUCL30388 rna-NM_001181003.1_MUCL30388 cds-NP_011377.1_MUCL30388 99.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:251220-252257:- gene-YGL138C_MUCL39482 rna-NM_001181003.1_MUCL39482 cds-NP_011377.1_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:254471-255508:- gene-YGL138C_MUCL42920 rna-NM_001181003.1_MUCL42920 cds-NP_011377.1_MUCL42920 99.7 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:248494-249531:- gene-YGL138C_NCIM3186 rna-NM_001181003.1_NCIM3186 cds-NP_011377.1_NCIM3186 99.5 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:242711-243748:- gene-YGL138C_NCYC1407 rna-NM_001181003.1_NCYC1407 cds-NP_011377.1_NCYC1407 99.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:244600-245637:- gene-YGL138C_PE2H3 rna-NM_001181003.1_PE2H3 cds-NP_011377.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:249598-250635:- gene-YGL138C_PE2H4 rna-NM_001181003.1_PE2H4 cds-NP_011377.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:248494-249531:- gene-YGL138C_S288C rna-NM_001181003.1_S288C cds-NP_011377.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000081.1:5216-6253:+ gene-YGL138C_SA1 rna-NM_001181003.1_SA1 cds-NP_011377.1_SA1 99.9 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:242704-243741:- gene-YGL138C_ThermosaccDry rna-NM_001181003.1_ThermosaccDry cds-NP_011377.1_ThermosaccDry 99.4 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:249514-250551:- gene-YGL138C_VR1 rna-NM_001181003.1_VR1 cds-NP_011377.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000014.1:240781-241818:- gene-YGL138C_ZTW1 rna-NM_001181003.1_ZTW1 cds-NP_011377.1_ZTW1 99.5 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:246819-247856:- gene-YGL138C_Sparadoxus rna-NM_001181003.1_Sparadoxus cds-NP_011377.1_Sparadoxus 83.9 100.0 Verified 1 1 1 False True False False False

Additional files