Gene name: YGL108C
Reference locus (S288C): YGL108C
Gene biotype: protein_coding
Description: Uncharacterized protein YGL108C; Protein of unknown function, predicted to be palmitoylated; SWAT-GFP, seamless-GFP and mCherry C-terminal fusion proteins localize to the cytosol, while N-terminal GFP fusion protein localizes to the cell periphery; protein abundance increases in response to DNA replication stress; To S.pombe new13
Top 10 interactors (score): WSC2 (0.802); CDC48 (0.647); BFA1 (0.4)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:306975-307397:- | gene-YGL108C_AKU4011 | rna-NM_001180973.3_AKU4011 | cds-NP_011407.3_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:98349-98771:+ | gene-YGL108C_BG1 | rna-NM_001180973.3_BG1 | cds-NP_011407.3_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:309134-309556:- | gene-YGL108C_Bruggeman | rna-NM_001180973.3_Bruggeman | cds-NP_011407.3_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:304656-305078:- | gene-YGL108C_CAT1 | rna-NM_001180973.3_CAT1 | cds-NP_011407.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:310301-310723:- | gene-YGL108C_CBS1585 | rna-NM_001180973.3_CBS1585 | cds-NP_011407.3_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:304604-305026:- | gene-YGL108C_CBS436 | rna-NM_001180973.3_CBS436 | cds-NP_011407.3_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:294994-295416:- | gene-YGL108C_CBS6412 | rna-NM_001180973.3_CBS6412 | cds-NP_011407.3_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:304599-305021:- | gene-YGL108C_CBS6413 | rna-NM_001180973.3_CBS6413 | cds-NP_011407.3_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:303836-304258:- | gene-YGL108C_CENPK1137D | rna-NM_001180973.3_CENPK1137D | cds-NP_011407.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:296048-296470:- | gene-YGL108C_EthanolRed | rna-NM_001180973.3_EthanolRed | cds-NP_011407.3_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:298603-299025:- | gene-YGL108C_FaliES1 | rna-NM_001180973.3_FaliES1 | cds-NP_011407.3_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000046.1:3121-3543:+ | gene-YGL108C_JAY291 | rna-NM_001180973.3_JAY291 | cds-NP_011407.3_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:306104-306526:- | gene-YGL108C_MUCL30387 | rna-NM_001180973.3_MUCL30387 | cds-NP_011407.3_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:309195-309617:- | gene-YGL108C_MUCL30388 | rna-NM_001180973.3_MUCL30388 | cds-NP_011407.3_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:306814-307236:- | gene-YGL108C_MUCL39482 | rna-NM_001180973.3_MUCL39482 | cds-NP_011407.3_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:310093-310515:- | gene-YGL108C_MUCL42920 | rna-NM_001180973.3_MUCL42920 | cds-NP_011407.3_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:303649-304071:- | gene-YGL108C_NCIM3186 | rna-NM_001180973.3_NCIM3186 | cds-NP_011407.3_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:298304-298726:- | gene-YGL108C_NCYC1407 | rna-NM_001180973.3_NCYC1407 | cds-NP_011407.3_NCYC1407 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:299688-300110:- | gene-YGL108C_PE2H3 | rna-NM_001180973.3_PE2H3 | cds-NP_011407.3_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:304686-305108:- | gene-YGL108C_PE2H4 | rna-NM_001180973.3_PE2H4 | cds-NP_011407.3_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:303649-304071:- | gene-YGL108C_S288C | rna-NM_001180973.3_S288C | cds-NP_011407.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000064.1:48436-48858:- | gene-YGL108C_SA1 | rna-NM_001180973.3_SA1 | cds-NP_011407.3_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:298815-299237:- | gene-YGL108C_ThermosaccDry | rna-NM_001180973.3_ThermosaccDry | cds-NP_011407.3_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:408411-408833:- | gene-YGL108C_VR1 | rna-NM_001180973.3_VR1 | cds-NP_011407.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:296212-296634:- | gene-YGL108C_ZTW1 | rna-NM_001180973.3_ZTW1 | cds-NP_011407.3_ZTW1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:302632-303057:- | gene-YGL108C_Sparadoxus | rna-NM_001180973.3_Sparadoxus | cds-NP_011407.3_Sparadoxus | 88.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |