Gene name: YGL082W
Reference locus (S288C): YGL082W
Gene biotype: protein_coding
Description: Ubiquitin carboxyl-terminal hydrolase mindy-1/2; Uncharacterized protein YGL082W; Putative protein of unknown function; predicted prenylation/proteolysis target of Afc1p and Rce1p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; not an essential gene; YGL082W has a paralog, YPL191C, that arose from the whole genome duplication
Top 10 interactors (score): FAA4 (0.6); RPS31 (0.587); UBI4 (0.426); RUB1 (0.426); GCN2 (0.412)
Homologues (species, bitscore): FAM63B (Homo sapiens, 119.8); Fam63b (Mus musculus, 118.2); fam63a (Danio rerio, 115.9); fam63b (Xenopus tropicalis, 128.3); Y55F3AM.9 (Caenorhabditis elegans, 86.3); AT4G11860 (Arabidopsis thaliana, 83.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:358844-359989:+ | gene-YGL082W_AKU4011 | rna-NM_001180947.3_AKU4011 | cds-NP_011433.3_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:45429-46574:- | gene-YGL082W_BG1 | rna-NM_001180947.3_BG1 | cds-NP_011433.3_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:361325-362470:+ | gene-YGL082W_Bruggeman | rna-NM_001180947.3_Bruggeman | cds-NP_011433.3_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:358228-359373:+ | gene-YGL082W_CAT1 | rna-NM_001180947.3_CAT1 | cds-NP_011433.3_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:362169-363314:+ | gene-YGL082W_CBS1585 | rna-NM_001180947.3_CBS1585 | cds-NP_011433.3_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:356440-357585:+ | gene-YGL082W_CBS436 | rna-NM_001180947.3_CBS436 | cds-NP_011433.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:346549-347694:+ | gene-YGL082W_CBS6412 | rna-NM_001180947.3_CBS6412 | cds-NP_011433.3_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:356473-357618:+ | gene-YGL082W_CBS6413 | rna-NM_001180947.3_CBS6413 | cds-NP_011433.3_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:356016-357161:+ | gene-YGL082W_CENPK1137D | rna-NM_001180947.3_CENPK1137D | cds-NP_011433.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:347915-349060:+ | gene-YGL082W_EthanolRed | rna-NM_001180947.3_EthanolRed | cds-NP_011433.3_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:350476-351621:+ | gene-YGL082W_FaliES1 | rna-NM_001180947.3_FaliES1 | cds-NP_011433.3_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000369.1:36099-37244:+ | gene-YGL082W_JAY291 | rna-NM_001180947.3_JAY291 | cds-NP_011433.3_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:358302-359447:+ | gene-YGL082W_MUCL30387 | rna-NM_001180947.3_MUCL30387 | cds-NP_011433.3_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:361286-362431:+ | gene-YGL082W_MUCL30388 | rna-NM_001180947.3_MUCL30388 | cds-NP_011433.3_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:358697-359842:+ | gene-YGL082W_MUCL39482 | rna-NM_001180947.3_MUCL39482 | cds-NP_011433.3_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:363585-364730:+ | gene-YGL082W_MUCL42920 | rna-NM_001180947.3_MUCL42920 | cds-NP_011433.3_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:355827-356972:+ | gene-YGL082W_NCIM3186 | rna-NM_001180947.3_NCIM3186 | cds-NP_011433.3_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:350232-351377:+ | gene-YGL082W_NCYC1407 | rna-NM_001180947.3_NCYC1407 | cds-NP_011433.3_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:351865-353010:+ | gene-YGL082W_PE2H3 | rna-NM_001180947.3_PE2H3 | cds-NP_011433.3_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:356850-357995:+ | gene-YGL082W_PE2H4 | rna-NM_001180947.3_PE2H4 | cds-NP_011433.3_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:355827-356972:+ | gene-YGL082W_S288C | rna-NM_001180947.3_S288C | cds-NP_011433.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000089.1:33240-34385:+ | gene-YGL082W_SA1 | rna-NM_001180947.3_SA1 | cds-NP_011433.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:350729-351874:+ | gene-YGL082W_ThermosaccDry | rna-NM_001180947.3_ThermosaccDry | cds-NP_011433.3_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:460592-461737:+ | gene-YGL082W_VR1 | rna-NM_001180947.3_VR1 | cds-NP_011433.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:348094-349239:+ | gene-YGL082W_ZTW1 | rna-NM_001180947.3_ZTW1 | cds-NP_011433.3_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:353714-354859:+ | gene-YGL082W_Sparadoxus | rna-NM_001180947.3_Sparadoxus | cds-NP_011433.3_Sparadoxus | 90.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |