YGL041C-B (YGL041C-B)

Gene profile

Gene name: YGL041C-B
Reference locus (S288C): YGL041C-B
Gene biotype: protein_coding

Description: Uncharacterized protein YGL041C-B; Putative protein of unknown function; identified by fungal homology and RT-PCR; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:420773-420955:- gene-YGL041C-B_AKU4011 rna-NM_001184550.1_AKU4011 cds-NP_878074.1_AKU4011 100.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000060.1:155175-155357:+ gene-YGL041C-B_BG1 rna-NM_001184550.1_BG1 cds-NP_878074.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:421595-421777:- gene-YGL041C-B_Bruggeman rna-NM_001184550.1_Bruggeman cds-NP_878074.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:419756-419938:- gene-YGL041C-B_CAT1 rna-NM_001184550.1_CAT1 cds-NP_878074.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:422236-422418:- gene-YGL041C-B_CBS1585 rna-NM_001184550.1_CBS1585 cds-NP_878074.1_CBS1585 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005349.1:416374-416556:- gene-YGL041C-B_CBS436 rna-NM_001184550.1_CBS436 cds-NP_878074.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:414909-415091:- gene-YGL041C-B_CBS6412 rna-NM_001184550.1_CBS6412 cds-NP_878074.1_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:418954-419136:- gene-YGL041C-B_CBS6413 rna-NM_001184550.1_CBS6413 cds-NP_878074.1_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:418545-418727:- gene-YGL041C-B_CENPK1137D rna-NM_001184550.1_CENPK1137D cds-NP_878074.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:409155-409337:- gene-YGL041C-B_EthanolRed rna-NM_001184550.1_EthanolRed cds-NP_878074.1_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:412417-412599:- gene-YGL041C-B_FaliES1 rna-NM_001184550.1_FaliES1 cds-NP_878074.1_FaliES1 100.0 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000165.1:4232-4414:+ gene-YGL041C-B_JAY291 rna-NM_001184550.1_JAY291 cds-NP_878074.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:418551-418733:- gene-YGL041C-B_MUCL30387 rna-NM_001184550.1_MUCL30387 cds-NP_878074.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:421595-421777:- gene-YGL041C-B_MUCL30388 rna-NM_001184550.1_MUCL30388 cds-NP_878074.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:418030-418212:- gene-YGL041C-B_MUCL39482 rna-NM_001184550.1_MUCL39482 cds-NP_878074.1_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:426448-426630:- gene-YGL041C-B_MUCL42920 rna-NM_001184550.1_MUCL42920 cds-NP_878074.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:418704-418886:- gene-YGL041C-B_NCIM3186 rna-NM_001184550.1_NCIM3186 cds-NP_878074.1_NCIM3186 100.0 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:412158-412340:- gene-YGL041C-B_NCYC1407 rna-NM_001184550.1_NCYC1407 cds-NP_878074.1_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:414733-414915:- gene-YGL041C-B_PE2H3 rna-NM_001184550.1_PE2H3 cds-NP_878074.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:419783-419965:- gene-YGL041C-B_PE2H4 rna-NM_001184550.1_PE2H4 cds-NP_878074.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:418704-418886:- gene-YGL041C-B_S288C rna-NM_001184550.1_S288C cds-NP_878074.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000021.1:136742-136924:+ gene-YGL041C-B_SA1 rna-NM_001184550.1_SA1 cds-NP_878074.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:431781-431963:- gene-YGL041C-B_ThermosaccDry rna-NM_001184550.1_ThermosaccDry cds-NP_878074.1_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:521720-521902:- gene-YGL041C-B_VR1 rna-NM_001184550.1_VR1 cds-NP_878074.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000014.1:410355-410537:- gene-YGL041C-B_ZTW1 rna-NM_001184550.1_ZTW1 cds-NP_878074.1_ZTW1 99.4 100.0 Verified 1 1 1 False True False False False

Additional files