YGL006W-A (YGL006W-A)

Gene profile

Gene name: YGL006W-A
Reference locus (S288C): YGL006W-A
Gene biotype: protein_coding

Description: Uncharacterized protein YGL006W-A; Putative protein of unknown function; identified by SAGE

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:487474-487584:+ gene-YGL006W-A_AKU4011 rna-NM_001184634.1_AKU4011 cds-NP_878076.1_AKU4011 100.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000060.1:88527-88638:- gene-YGL006W-A_BG1 rna-NM_001184634.1_BG1 cds-NP_878076.1_BG1 98.2 100.0 Verified 1 1 0 False False False True False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:488442-488552:+ gene-YGL006W-A_Bruggeman rna-NM_001184634.1_Bruggeman cds-NP_878076.1_Bruggeman 99.0 100.0 Verified 1 1 0 False False True False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:486983-487095:+ gene-YGL006W-A_CAT1 rna-NM_001184634.1_CAT1 cds-NP_878076.1_CAT1 96.4 100.0 Mismatch 1 1 0 False False True False False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:488947-489057:+ gene-YGL006W-A_CBS1585 rna-NM_001184634.1_CBS1585 cds-NP_878076.1_CBS1585 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005349.1:483319-483437:+ gene-YGL006W-A_CBS436 rna-NM_001184634.1_CBS436 cds-NP_878076.1_CBS436 92.4 100.0 Mismatch 1 1 0 False False True False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:481563-481673:+ gene-YGL006W-A_CBS6412 rna-NM_001184634.1_CBS6412 cds-NP_878076.1_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:485619-485729:+ gene-YGL006W-A_CBS6413 rna-NM_001184634.1_CBS6413 cds-NP_878076.1_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:485240-485350:+ gene-YGL006W-A_CENPK1137D rna-NM_001184634.1_CENPK1137D cds-NP_878076.1_CENPK1137D 99.0 100.0 Verified 1 1 0 False False True False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:475845-475955:+ gene-YGL006W-A_EthanolRed rna-NM_001184634.1_EthanolRed cds-NP_878076.1_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:479097-479207:+ gene-YGL006W-A_FaliES1 rna-NM_001184634.1_FaliES1 cds-NP_878076.1_FaliES1 100.0 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000020.1:17725-17837:+ gene-YGL006W-A_JAY291 rna-NM_001184634.1_JAY291 cds-NP_878076.1_JAY291 97.3 100.0 Verified 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:485664-485774:+ gene-YGL006W-A_MUCL30387 rna-NM_001184634.1_MUCL30387 cds-NP_878076.1_MUCL30387 99.0 100.0 Verified 1 1 0 False False True False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:488215-488325:+ gene-YGL006W-A_MUCL30388 rna-NM_001184634.1_MUCL30388 cds-NP_878076.1_MUCL30388 99.0 100.0 Verified 1 1 0 False False True False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:484786-484896:+ gene-YGL006W-A_MUCL39482 rna-NM_001184634.1_MUCL39482 cds-NP_878076.1_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:494217-494327:+ gene-YGL006W-A_MUCL42920 rna-NM_001184634.1_MUCL42920 cds-NP_878076.1_MUCL42920 99.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:485423-485533:+ gene-YGL006W-A_NCIM3186 rna-NM_001184634.1_NCIM3186 cds-NP_878076.1_NCIM3186 99.0 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:478807-478917:+ gene-YGL006W-A_NCYC1407 rna-NM_001184634.1_NCYC1407 cds-NP_878076.1_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:481494-481605:+ gene-YGL006W-A_PE2H3 rna-NM_001184634.1_PE2H3 cds-NP_878076.1_PE2H3 98.2 100.0 Verified 1 1 0 False False False True False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:486544-486655:+ gene-YGL006W-A_PE2H4 rna-NM_001184634.1_PE2H4 cds-NP_878076.1_PE2H4 98.2 100.0 Verified 1 1 0 False False False True False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:485423-485533:+ gene-YGL006W-A_S288C rna-NM_001184634.1_S288C cds-NP_878076.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000021.1:70048-70160:- gene-YGL006W-A_SA1 rna-NM_001184634.1_SA1 cds-NP_878076.1_SA1 96.4 100.0 Mismatch 1 1 0 False False True False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:498422-498532:+ gene-YGL006W-A_ThermosaccDry rna-NM_001184634.1_ThermosaccDry cds-NP_878076.1_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America MBVZ01000247.1:417-528:+ gene-YGL006W-A_VR1 rna-NM_001184634.1_VR1 cds-NP_878076.1_VR1 98.2 100.0 Verified 1 1 0 False False False True False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000014.1:477020-477131:+ gene-YGL006W-A_ZTW1 rna-NM_001184634.1_ZTW1 cds-NP_878076.1_ZTW1 98.2 100.0 Verified 1 1 0 False False False True False

Additional files