Gene name: YGK3
Reference locus (S288C): YOL128C
Gene biotype: protein_coding
Description: Glycogen synthase kinase-3 homolog YGK3; Protein kinase related to mammalian GSK-3 glycogen synthase kinases; GSK-3 homologs (Mck1p, Rim11p, Mrk1p, Ygk3p) are involved in control of Msn2p-dependent transcription of stress responsive genes and in protein degradation; YGK3 has a paralog, MCK1, that arose from the whole genome duplication
Top 10 interactors (score): CAK1 (0.961); SSN3 (0.907); PGM2 (0.812); DAS2 (0.739); FUR1 (0.739); URK1 (0.739); RGS2 (0.736); SST2 (0.736); SKI8 (0.72); TAF5 (0.72); HRR25 (0.716); CRZ1 (0.713); SPT16 (0.711); TRM13 (0.698); KIN28 (0.695); PKP2 (0.685); MSN2 (0.676); RPB3 (0.668); RPO26 (0.66); BMH2 (0.659)
Homologues (species, bitscore): GSK3B (Homo sapiens, 219.9); Gsk3b (Mus musculus, 221.9); gsk3b (Danio rerio, 220.7); gsk3b (Xenopus tropicalis, 220.7); gskt (Drosophila melanogaster, 217.6); gsk-3 (Caenorhabditis elegans, 222.6); ATSK12 (Arabidopsis thaliana, 216.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:67008-68135:- | gene-YOL128C_AKU4011 | rna-NM_001183382.1_AKU4011 | cds-NP_014513.1_AKU4011 | 98.9 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000172.1:32631-33758:- | gene-YOL128C_BG1 | rna-NM_001183382.1_BG1 | cds-NP_014513.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:68284-69411:- | gene-YOL128C_Bruggeman | rna-NM_001183382.1_Bruggeman | cds-NP_014513.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:67242-68369:- | gene-YOL128C_CAT1 | rna-NM_001183382.1_CAT1 | cds-NP_014513.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:61484-62611:- | gene-YOL128C_CBS1585 | rna-NM_001183382.1_CBS1585 | cds-NP_014513.1_CBS1585 | 98.8 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:67332-68459:- | gene-YOL128C_CBS436 | rna-NM_001183382.1_CBS436 | cds-NP_014513.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:61348-62475:- | gene-YOL128C_CBS6412 | rna-NM_001183382.1_CBS6412 | cds-NP_014513.1_CBS6412 | 98.9 | 99.9 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:67816-68943:- | gene-YOL128C_CBS6413 | rna-NM_001183382.1_CBS6413 | cds-NP_014513.1_CBS6413 | 98.9 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:78249-79376:- | gene-YOL128C_CENPK1137D | rna-NM_001183382.1_CENPK1137D | cds-NP_014513.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:65259-66386:- | gene-YOL128C_EthanolRed | rna-NM_001183382.1_EthanolRed | cds-NP_014513.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:67288-68415:- | gene-YOL128C_FaliES1 | rna-NM_001183382.1_FaliES1 | cds-NP_014513.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000329.1:14132-15259:+ | gene-YOL128C_JAY291 | rna-NM_001183382.1_JAY291 | cds-NP_014513.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:72924-74051:- | gene-YOL128C_MUCL30387 | rna-NM_001183382.1_MUCL30387 | cds-NP_014513.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:75919-77046:- | gene-YOL128C_MUCL30388 | rna-NM_001183382.1_MUCL30388 | cds-NP_014513.1_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:69419-70546:- | gene-YOL128C_MUCL39482 | rna-NM_001183382.1_MUCL39482 | cds-NP_014513.1_MUCL39482 | 98.8 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:85304-86431:- | gene-YOL128C_MUCL42920 | rna-NM_001183382.1_MUCL42920 | cds-NP_014513.1_MUCL42920 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:78241-79368:- | gene-YOL128C_NCIM3186 | rna-NM_001183382.1_NCIM3186 | cds-NP_014513.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:75458-76585:- | gene-YOL128C_NCYC1407 | rna-NM_001183382.1_NCYC1407 | cds-NP_014513.1_NCYC1407 | 98.9 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:53891-55018:- | gene-YOL128C_PE2H3 | rna-NM_001183382.1_PE2H3 | cds-NP_014513.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:70839-71966:- | gene-YOL128C_PE2H4 | rna-NM_001183382.1_PE2H4 | cds-NP_014513.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:78352-79479:- | gene-YOL128C_S288C | rna-NM_001183382.1_S288C | cds-NP_014513.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:51780-52907:- | gene-YOL128C_SA1 | rna-NM_001183382.1_SA1 | cds-NP_014513.1_SA1 | 96.6 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:66426-67553:- | gene-YOL128C_ThermosaccDry | rna-NM_001183382.1_ThermosaccDry | cds-NP_014513.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:67086-68213:- | gene-YOL128C_VR1 | rna-NM_001183382.1_VR1 | cds-NP_014513.1_VR1 | 88.3 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:66180-67307:- | gene-YOL128C_ZTW1 | rna-NM_001183382.1_ZTW1 | cds-NP_014513.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:68870-69997:- | gene-YOL128C_Sparadoxus | rna-NM_001183382.1_Sparadoxus | cds-NP_014513.1_Sparadoxus | 89.2 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |