Gene name: YFL066C
Reference locus (S288C): YFL066C
Gene biotype: protein_coding
Description: Helicase-like protein encoded within the telomeric Y' element; induced by treatment with 8-methoxypsoralen and UVA irradiation; SWAT-GFP and mCherry fusion proteins localize to the nucleus
Top 10 interactors (score): YFL064C (0.988); YFL065C (0.988); YFL067W (0.976); YHL049C (0.962); YHR219W (0.962); YHL050C (0.876); YHR218W (0.874); YBL112C (0.872); YEL076C (0.872); YEL077C (0.872); YBL113C (0.872); YPR203W (0.872); YLR464W (0.872); YML133C (0.872); YBL111C (0.872); YJL225C (0.872); YER189W (0.864); YLR462W (0.864); YRF1-6 (0.862); YRF1-4 (0.858)
Homologues (species, bitscore): EIF4A1 (Homo sapiens, 50.8); Eif4a1 (Mus musculus, 50.8); eif4a1b (Danio rerio, 50.1); eif4a1 (Xenopus tropicalis, 50.4); inf-1 (Caenorhabditis elegans, 52.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | JH711427.1:2-1172:- | gene-YFL066C_CENPK1137D | rna-NM_001179901.1_CENPK1137D | cds-NP_116589.1_CENPK1137D | 98.7 | 99.3 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000178.1:1-784:- | gene-YFL066C_JAY291 | rna-NM_001179901.1_JAY291 | cds-NP_116589.1_JAY291 | 64.2 | 66.4 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:3253-4429:- | gene-YFL066C_MUCL30387 | rna-NM_001179901.1_MUCL30387 | cds-NP_116589.1_MUCL30387 | 92.2 | 99.6 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:131-1309:- | gene-YFL066C_MUCL30388 | rna-NM_001179901.1_MUCL30388 | cds-NP_116589.1_MUCL30388 | 99.1 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011815.1:1436-2614:- | gene-YFL066C_NCIM3186 | rna-NM_001179901.1_NCIM3186 | cds-NP_116589.1_NCIM3186 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:578-1757:- | gene-YFL066C_PE2H3 | rna-NM_001179901.1_PE2H3 | cds-NP_116589.1_PE2H3 | 98.4 | 99.8 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001138.5:1437-2615:- | gene-YFL066C_S288C | rna-NM_001179901.1_S288C | cds-NP_116589.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:393-1571:- | gene-YFL066C_VR1 | rna-NM_001179901.1_VR1 | cds-NP_116589.1_VR1 | 98.8 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047492.1:292615-293793:+ | gene-YFL066C_Sparadoxus | rna-NM_001179901.1_Sparadoxus | cds-NP_116589.1_Sparadoxus | 99.0 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |