Gene name: YFL040W
Reference locus (S288C): YFL040W
Gene biotype: protein_coding
Description: Probable metabolite transport protein YFL040W; Putative transporter; member of the sugar porter family; YFL040W is not an essential gene; may have a role in intracellular sterol transport
Top 10 interactors (score): CTS1 (0.895); CRH1 (0.88); CIS3 (0.829); BUD17 (0.748); RBH2 (0.747); YFH7 (0.706); YJL163C (0.705); MBR1 (0.68); FLX1 (0.677); TRM44 (0.676); YMR310C (0.659); TRM12 (0.62); IKS1 (0.586); LSB6 (0.575); DIT2 (0.572); HAL9 (0.572); MTQ2 (0.569); QDR3 (0.565); GAT1 (0.547); ZNF1 (0.528)
Homologues (species, bitscore): SLC2A14 (Homo sapiens, 97.4); Slc2a3 (Mus musculus, 94.7); slc2a3a (Danio rerio, 98.6); ENSXETP00000016917 (Xenopus tropicalis, 96.7); Glut1 (Drosophila melanogaster, 107.8); hmit-1.3 (Caenorhabditis elegans, 89.7); STP2 (Arabidopsis thaliana, 115.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005300.1:47685-49307:+ | gene-YFL040W_AKU4011 | rna-NM_001179926.1_AKU4011 | cds-NP_116613.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000182.1:20481-22103:- | gene-YFL040W_BG1 | rna-NM_001179926.1_BG1 | cds-NP_116613.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005508.1:46568-48190:+ | gene-YFL040W_Bruggeman | rna-NM_001179926.1_Bruggeman | cds-NP_116613.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005524.1:51455-53077:+ | gene-YFL040W_CAT1 | rna-NM_001179926.1_CAT1 | cds-NP_116613.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005364.1:48362-49984:+ | gene-YFL040W_CBS1585 | rna-NM_001179926.1_CBS1585 | cds-NP_116613.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005348.1:22001-23623:+ | gene-YFL040W_CBS436 | rna-NM_001179926.1_CBS436 | cds-NP_116613.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005332.1:48602-50224:+ | gene-YFL040W_CBS6412 | rna-NM_001179926.1_CBS6412 | cds-NP_116613.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005316.1:50763-52385:+ | gene-YFL040W_CBS6413 | rna-NM_001179926.1_CBS6413 | cds-NP_116613.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001527.1:47676-49298:+ | gene-YFL040W_CENPK1137D | rna-NM_001179926.1_CENPK1137D | cds-NP_116613.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005476.1:47029-48651:+ | gene-YFL040W_EthanolRed | rna-NM_001179926.1_EthanolRed | cds-NP_116613.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005540.1:48237-49859:+ | gene-YFL040W_FaliES1 | rna-NM_001179926.1_FaliES1 | cds-NP_116613.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000448.1:56695-58317:+ | gene-YFL040W_JAY291 | rna-NM_001179926.1_JAY291 | cds-NP_116613.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005412.1:48656-50278:+ | gene-YFL040W_MUCL30387 | rna-NM_001179926.1_MUCL30387 | cds-NP_116613.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005444.1:46557-48179:+ | gene-YFL040W_MUCL30388 | rna-NM_001179926.1_MUCL30388 | cds-NP_116613.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005284.1:46878-48500:+ | gene-YFL040W_MUCL39482 | rna-NM_001179926.1_MUCL39482 | cds-NP_116613.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005428.1:44586-46208:+ | gene-YFL040W_MUCL42920 | rna-NM_001179926.1_MUCL42920 | cds-NP_116613.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011815.1:51349-52971:+ | gene-YFL040W_NCIM3186 | rna-NM_001179926.1_NCIM3186 | cds-NP_116613.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005268.1:47951-49573:+ | gene-YFL040W_NCYC1407 | rna-NM_001179926.1_NCYC1407 | cds-NP_116613.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994145.1:67849-69471:+ | gene-YFL040W_PE2H3 | rna-NM_001179926.1_PE2H3 | cds-NP_116613.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999877.1:67400-69022:+ | gene-YFL040W_PE2H4 | rna-NM_001179926.1_PE2H4 | cds-NP_116613.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001138.5:51350-52972:+ | gene-YFL040W_S288C | rna-NM_001179926.1_S288C | cds-NP_116613.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:282662-284284:- | gene-YFL040W_SA1 | rna-NM_001179926.1_SA1 | cds-NP_116613.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005492.1:47425-49047:+ | gene-YFL040W_ThermosaccDry | rna-NM_001179926.1_ThermosaccDry | cds-NP_116613.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005460.1:55973-57595:+ | gene-YFL040W_VR1 | rna-NM_001179926.1_VR1 | cds-NP_116613.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000012.1:32722-34344:+ | gene-YFL040W_ZTW1 | rna-NM_001179926.1_ZTW1 | cds-NP_116613.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047492.1:71792-73405:+ | gene-YFL040W_Sparadoxus | rna-NM_001179926.1_Sparadoxus | cds-NP_116613.1_Sparadoxus | 89.3 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |