Gene name: YFL002W-B
Reference locus (S288C): YFL002W-B
Gene biotype: protein_coding
Description: Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag
Top 10 interactors (score): AAD10 (0.651); AAD6 (0.612); PMA2 (0.61); GTT2 (0.572); AQR1 (0.567); SRX1 (0.561); FLR1 (0.551); GPX2 (0.474)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:573093-574409:- | gene-YFL002W-B_NCIM3186 | rna-NM_001184430.1_NCIM3186 | cds-NP_058157.1_NCIM3186 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:214243-215559:- | gene-YFL002W-B_PE2H3 | rna-NM_001184430.1_PE2H3 | cds-NP_058157.1_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001138.5:138204-139520:+ | gene-YFL002W-B_S288C | rna-NM_001184430.1_S288C | cds-NP_058157.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |