YER190C-B (YER190C-B)

Gene profile

Gene name: YER190C-B
Reference locus (S288C): YER190C-B
Gene biotype: protein_coding

Description: Uncharacterized protein; Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005303.1:1028-1510:+ gene-YER190C-B_AKU4011 rna-NM_001184590.1_AKU4011 cds-NP_001073292.1_AKU4011 99.1 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000109.1:6432-6914:- gene-YER190C-B_BG1 rna-NM_001184590.1_BG1 cds-NP_001073292.1_BG1 99.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:26-508:+ gene-YER190C-B_Bruggeman rna-NM_001184590.1_Bruggeman cds-NP_001073292.1_Bruggeman 99.3 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:1068506-1068988:- gene-YER190C-B_CAT1 rna-NM_001184590.1_CAT1 cds-NP_001073292.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:1028-1510:+ gene-YER190C-B_CBS1585 rna-NM_001184590.1_CBS1585 cds-NP_001073292.1_CBS1585 99.1 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005352.1:1369-1851:+ gene-YER190C-B_CBS436 rna-NM_001184590.1_CBS436 cds-NP_001073292.1_CBS436 96.2 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:1236-1718:+ gene-YER190C-B_CBS6412 rna-NM_001184590.1_CBS6412 cds-NP_001073292.1_CBS6412 99.1 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:1004-1486:+ gene-YER190C-B_CBS6413 rna-NM_001184590.1_CBS6413 cds-NP_001073292.1_CBS6413 98.9 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:579-1061:+ gene-YER190C-B_CENPK1137D rna-NM_001184590.1_CENPK1137D cds-NP_001073292.1_CENPK1137D 99.7 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:1473863-1474345:- gene-YER190C-B_EthanolRed rna-NM_001184590.1_EthanolRed cds-NP_001073292.1_EthanolRed 99.1 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005543.1:917-1399:+ gene-YER190C-B_FaliES1 rna-NM_001184590.1_FaliES1 cds-NP_001073292.1_FaliES1 99.1 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:1466711-1467193:- gene-YER190C-B_MUCL30388 rna-NM_001184590.1_MUCL30388 cds-NP_001073292.1_MUCL30388 99.3 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:898255-898737:- gene-YER190C-B_MUCL39482 rna-NM_001184590.1_MUCL39482 cds-NP_001073292.1_MUCL39482 99.1 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:1055970-1056452:- gene-YER190C-B_MUCL42920 rna-NM_001184590.1_MUCL42920 cds-NP_001073292.1_MUCL42920 99.3 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:1089746-1090228:- gene-YER190C-B_1_NCIM3186 Unknown Unknown 100.0 100.0 Verified 4 2 1 Unknown Unknown Unknown Unknown Unknown
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:626-1108:+ gene-YER190C-B_3_NCIM3186 Unknown Unknown 100.0 100.0 Verified 4 4 1 Unknown Unknown Unknown Unknown Unknown
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:946839-947321:- gene-YER190C-B_2_NCIM3186 Unknown Unknown 100.0 100.0 Verified 4 3 1 Unknown Unknown Unknown Unknown Unknown
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011814.1:575679-576161:- gene-YER190C-B_NCIM3186 rna-NM_001184590.1_NCIM3186 cds-NP_001073292.1_NCIM3186 100.0 100.0 Verified 4 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005271.1:960-1442:+ gene-YER190C-B_NCYC1407 rna-NM_001184590.1_NCYC1407 cds-NP_001073292.1_NCYC1407 99.1 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994144.1:4857-5339:+ gene-YER190C-B_PE2H3 rna-NM_001184590.1_PE2H3 cds-NP_001073292.1_PE2H3 99.5 100.0 Mismatch 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:773-1255:+ gene-YER190C-B_PE2H4 rna-NM_001184590.1_PE2H4 cds-NP_001073292.1_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:1089746-1090228:- gene-YER190C-B_1_S288C Unknown Unknown 100.0 100.0 Verified 4 2 1 Unknown Unknown Unknown Unknown Unknown
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:643-1125:+ gene-YER190C-B_3_S288C Unknown Unknown 100.0 100.0 Verified 4 4 1 Unknown Unknown Unknown Unknown Unknown
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:946856-947338:- gene-YER190C-B_2_S288C Unknown Unknown 100.0 100.0 Verified 4 3 1 Unknown Unknown Unknown Unknown Unknown
S288C GCF_000146045.2 Laboratory Not applicable NC_001137.3:575680-576162:- gene-YER190C-B_S288C rna-NM_001184590.1_S288C cds-NP_001073292.1_S288C 100.0 100.0 Verified 4 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005495.1:1078-1560:+ gene-YER190C-B_ThermosaccDry rna-NM_001184590.1_ThermosaccDry cds-NP_001073292.1_ThermosaccDry 99.1 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005460.1:1-354:+ gene-YER190C-B_VR1 rna-NM_001184590.1_VR1 cds-NP_001073292.1_VR1 72.6 73.2 Mismatch 1 1 0 False False True False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:834462-834944:- gene-YER190C-B_Sparadoxus rna-NM_001184590.1_Sparadoxus cds-NP_001073292.1_Sparadoxus 99.1 100.0 Verified 1 1 1 False True False False False

Additional files