Gene name: YER160C
Reference locus (S288C): YER160C
Gene biotype: protein_coding
Description: Transposon Ty1-ER2 Gag-Pol polyprotein; Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes
Top 10 interactors (score): SMX2 (0.693); CST26 (0.673); SNP1 (0.53)
Homologues (species, bitscore): CRK8 (Arabidopsis thaliana, 99.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MUCL30387 | GCA_001738515.1 | Bread | Europe | MBVX01000357.1:1-696:+ | gene-YER160C_MUCL30387 | rna-NM_001179050.4_MUCL30387 | cds-NP_011087.3_MUCL30387 | 13.1 | 13.2 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:720783-726051:+ | gene-YER160C_PE2H4 | rna-NM_001179050.4_PE2H4 | cds-NP_011087.3_PE2H4 | 98.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:492856-498124:- | gene-YER160C_S288C | rna-NM_001179050.4_S288C | cds-NP_011087.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |