YER159C-A (YER159C-A)

Gene profile

Gene name: YER159C-A
Reference locus (S288C): YER159C-A
Gene biotype: protein_coding

Description: Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:376957-378279:- gene-YER159C-A_NCIM3186 rna-NM_001184429.1_NCIM3186 cds-NP_058156.1_NCIM3186 97.3 100.0 Mismatch 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:720783-722105:+ gene-YER159C-A_PE2H4 rna-NM_001184429.1_PE2H4 cds-NP_058156.1_PE2H4 99.6 100.0 Mismatch 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:219386-220708:- gene-YER159C-A_1_S288C Unknown Unknown 100.0 100.0 Mismatch 2 2 1 Unknown Unknown Unknown Unknown Unknown
S288C GCF_000146045.2 Laboratory Not applicable NC_001137.3:496802-498124:- gene-YER159C-A_S288C rna-NM_001184429.1_S288C cds-NP_058156.1_S288C 100.0 100.0 Mismatch 2 1 1 True True False False False

Additional files