YER137C-A (YER137C-A)

Gene profile

Gene name: YER137C-A
Reference locus (S288C): YER137C-A
Gene biotype: protein_coding

Description: Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
CENPK1137D GCA_000269885.1 Laboratory Not Applicable JH711430.1:1-538:- gene-YER137C-A_CENPK1137D rna-NM_001184428.1_CENPK1137D cds-NP_058155.1_CENPK1137D 40.4 40.5 Unannotated 1 1 0 False False True False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011814.1:447701-449023:- gene-YER137C-A_NCIM3186 rna-NM_001184428.1_NCIM3186 cds-NP_058155.1_NCIM3186 77.0 100.0 Mismatch 1 1 0 False False True False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001137.3:447702-449024:- gene-YER137C-A_S288C rna-NM_001184428.1_S288C cds-NP_058155.1_S288C 100.0 100.0 Mismatch 1 1 1 True True False False False

Additional files