YER078W-A (YER078W-A)

Gene profile

Gene name: YER078W-A
Reference locus (S288C): YER078W-A
Gene biotype: protein_coding

Description: Uncharacterized protein YER078W-A; Putative protein of unknown function; identified by fungal homology and RT-PCR

Top 10 interactors (score): YER079W (0.945); AIM9 (0.941); SER3 (0.745)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005299.1:312423-312587:+ gene-YER078W-A_AKU4011 rna-NM_001184548.3_AKU4011 cds-NP_878068.3_AKU4011 98.7 100.0 Verified 1 1 0 False False True False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000011.1:113215-113379:- gene-YER078W-A_BG1 rna-NM_001184548.3_BG1 cds-NP_878068.3_BG1 99.3 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005507.1:322016-322180:+ gene-YER078W-A_Bruggeman rna-NM_001184548.3_Bruggeman cds-NP_878068.3_Bruggeman 99.3 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005523.1:316120-316284:+ gene-YER078W-A_CAT1 rna-NM_001184548.3_CAT1 cds-NP_878068.3_CAT1 99.3 100.0 Verified 1 1 0 False False True False False
CBS1585 GCA_001738375.1 Sake Asia CM005363.1:312288-312452:+ gene-YER078W-A_CBS1585 rna-NM_001184548.3_CBS1585 cds-NP_878068.3_CBS1585 98.7 100.0 Verified 1 1 0 False False True False False
CBS436 GCA_001738355.1 Sake Asia CM005347.1:314428-314592:+ gene-YER078W-A_CBS436 rna-NM_001184548.3_CBS436 cds-NP_878068.3_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005331.1:311745-311909:+ gene-YER078W-A_CBS6412 rna-NM_001184548.3_CBS6412 cds-NP_878068.3_CBS6412 98.7 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005315.1:317735-317899:+ gene-YER078W-A_CBS6413 rna-NM_001184548.3_CBS6413 cds-NP_878068.3_CBS6413 98.7 100.0 Verified 1 1 0 False False True False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001526.1:316557-316721:+ gene-YER078W-A_CENPK1137D rna-NM_001184548.3_CENPK1137D cds-NP_878068.3_CENPK1137D 99.3 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005475.1:312767-312931:+ gene-YER078W-A_EthanolRed rna-NM_001184548.3_EthanolRed cds-NP_878068.3_EthanolRed 98.7 100.0 Verified 1 1 0 False False True False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005539.1:313212-313376:+ gene-YER078W-A_FaliES1 rna-NM_001184548.3_FaliES1 cds-NP_878068.3_FaliES1 98.7 100.0 Verified 1 1 0 False False True False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000153.1:28271-28435:+ gene-YER078W-A_JAY291 rna-NM_001184548.3_JAY291 cds-NP_878068.3_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005411.1:317411-317575:+ gene-YER078W-A_MUCL30387 rna-NM_001184548.3_MUCL30387 cds-NP_878068.3_MUCL30387 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005443.1:313082-313246:+ gene-YER078W-A_MUCL30388 rna-NM_001184548.3_MUCL30388 cds-NP_878068.3_MUCL30388 99.3 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005283.1:311312-311476:+ gene-YER078W-A_MUCL39482 rna-NM_001184548.3_MUCL39482 cds-NP_878068.3_MUCL39482 98.7 100.0 Verified 1 1 0 False False True False False
MUCL42920 GCA_001738485.1 Bread Europe CM005427.1:318553-318717:+ gene-YER078W-A_MUCL42920 rna-NM_001184548.3_MUCL42920 cds-NP_878068.3_MUCL42920 99.3 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011814.1:318645-318809:+ gene-YER078W-A_NCIM3186 rna-NM_001184548.3_NCIM3186 cds-NP_878068.3_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005267.1:316376-316540:+ gene-YER078W-A_NCYC1407 rna-NM_001184548.3_NCYC1407 cds-NP_878068.3_NCYC1407 99.3 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994144.1:327024-327188:+ gene-YER078W-A_PE2H3 rna-NM_001184548.3_PE2H3 cds-NP_878068.3_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999876.1:316965-317129:+ gene-YER078W-A_PE2H4 rna-NM_001184548.3_PE2H4 cds-NP_878068.3_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001137.3:318646-318810:+ gene-YER078W-A_S288C rna-NM_001184548.3_S288C cds-NP_878068.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000023.1:28285-28449:+ gene-YER078W-A_SA1 rna-NM_001184548.3_SA1 cds-NP_878068.3_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005491.1:314009-314173:+ gene-YER078W-A_ThermosaccDry rna-NM_001184548.3_ThermosaccDry cds-NP_878068.3_ThermosaccDry 98.7 100.0 Verified 1 1 0 False False True False False
VR1 GCA_001738595.1 Bioethanol South America CM005459.1:314704-314868:+ gene-YER078W-A_VR1 rna-NM_001184548.3_VR1 cds-NP_878068.3_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000009.1:311172-311336:+ gene-YER078W-A_ZTW1 rna-NM_001184548.3_ZTW1 cds-NP_878068.3_ZTW1 99.3 100.0 Verified 1 1 1 False True False False False

Additional files