Gene name: YER053C-A
Reference locus (S288C): YER053C-A
Gene biotype: protein_coding
Description: Uncharacterized protein YER053C-A; Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): YDR415C (0.892); YMR265C (0.892); YGR182C (0.842); YOR343C (0.769); PXP1 (0.746); YLR162W (0.746); ESF1 (0.717); DOG1 (0.713); PAU3 (0.691); DOG2 (0.671); RSA1 (0.655); SPO21 (0.618); TIP20 (0.618); PHM6 (0.617); PHO92 (0.616); RFC4 (0.616); NCW2 (0.572); RAX2 (0.567); YGL188C-A (0.564); ATO3 (0.561)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:254739-254852:- | gene-YER053C-A_AKU4011 | rna-NM_001184444.1_AKU4011 | cds-NP_061492.1_AKU4011 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:170948-171061:+ | gene-YER053C-A_BG1 | rna-NM_001184444.1_BG1 | cds-NP_061492.1_BG1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:263529-263642:- | gene-YER053C-A_Bruggeman | rna-NM_001184444.1_Bruggeman | cds-NP_061492.1_Bruggeman | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:257684-257797:- | gene-YER053C-A_CAT1 | rna-NM_001184444.1_CAT1 | cds-NP_061492.1_CAT1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:254585-254698:- | gene-YER053C-A_CBS1585 | rna-NM_001184444.1_CBS1585 | cds-NP_061492.1_CBS1585 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:256497-256610:- | gene-YER053C-A_CBS436 | rna-NM_001184444.1_CBS436 | cds-NP_061492.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:254054-254167:- | gene-YER053C-A_CBS6412 | rna-NM_001184444.1_CBS6412 | cds-NP_061492.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:260079-260192:- | gene-YER053C-A_CBS6413 | rna-NM_001184444.1_CBS6413 | cds-NP_061492.1_CBS6413 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:258794-258907:- | gene-YER053C-A_CENPK1137D | rna-NM_001184444.1_CENPK1137D | cds-NP_061492.1_CENPK1137D | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:255065-255178:- | gene-YER053C-A_EthanolRed | rna-NM_001184444.1_EthanolRed | cds-NP_061492.1_EthanolRed | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:255535-255648:- | gene-YER053C-A_FaliES1 | rna-NM_001184444.1_FaliES1 | cds-NP_061492.1_FaliES1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000192.1:53288-53401:- | gene-YER053C-A_JAY291 | rna-NM_001184444.1_JAY291 | cds-NP_061492.1_JAY291 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:258986-259099:- | gene-YER053C-A_MUCL30387 | rna-NM_001184444.1_MUCL30387 | cds-NP_061492.1_MUCL30387 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:255154-255267:- | gene-YER053C-A_MUCL30388 | rna-NM_001184444.1_MUCL30388 | cds-NP_061492.1_MUCL30388 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:253607-253720:- | gene-YER053C-A_MUCL39482 | rna-NM_001184444.1_MUCL39482 | cds-NP_061492.1_MUCL39482 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:260670-260783:- | gene-YER053C-A_MUCL42920 | rna-NM_001184444.1_MUCL42920 | cds-NP_061492.1_MUCL42920 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:260932-261045:- | gene-YER053C-A_NCIM3186 | rna-NM_001184444.1_NCIM3186 | cds-NP_061492.1_NCIM3186 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:258689-258802:- | gene-YER053C-A_NCYC1407 | rna-NM_001184444.1_NCYC1407 | cds-NP_061492.1_NCYC1407 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:269315-269428:- | gene-YER053C-A_PE2H3 | rna-NM_001184444.1_PE2H3 | cds-NP_061492.1_PE2H3 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:259256-259369:- | gene-YER053C-A_PE2H4 | rna-NM_001184444.1_PE2H4 | cds-NP_061492.1_PE2H4 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:260933-261046:- | gene-YER053C-A_S288C | rna-NM_001184444.1_S288C | cds-NP_061492.1_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000059.1:47404-47517:- | gene-YER053C-A_SA1 | rna-NM_001184444.1_SA1 | cds-NP_061492.1_SA1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:256325-256438:- | gene-YER053C-A_ThermosaccDry | rna-NM_001184444.1_ThermosaccDry | cds-NP_061492.1_ThermosaccDry | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:255392-255505:- | gene-YER053C-A_VR1 | rna-NM_001184444.1_VR1 | cds-NP_061492.1_VR1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:253514-253627:- | gene-YER053C-A_ZTW1 | rna-NM_001184444.1_ZTW1 | cds-NP_061492.1_ZTW1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:257376-257489:- | gene-YER053C-A_Sparadoxus | rna-NM_001184444.1_Sparadoxus | cds-NP_061492.1_Sparadoxus | 95.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |