Gene name: YER010C
Reference locus (S288C): YER010C
Gene biotype: protein_coding
Description: Bifunctional HMG aldolase/oxaloacetate decarboxylase; requires divalent metal ions for activity; competitively inhibited by oxalate; forms a ring-shaped homotrimer; similar to members of the prokaryotic RraA family of class II (divalent metal ion dependent) pyruvate aldolases from the meta cleavage pathways of protocatechuate and gallate
Top 10 interactors (score): GPI12 (0.493); RNH201 (0.491); REX2 (0.481); FMP41 (0.406)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:166324-167028:- | gene-YER010C_AKU4011 | rna-NM_001178901.3_AKU4011 | cds-NP_010926.3_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:258653-259357:+ | gene-YER010C_BG1 | rna-NM_001178901.3_BG1 | cds-NP_010926.3_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:174008-174712:- | gene-YER010C_Bruggeman | rna-NM_001178901.3_Bruggeman | cds-NP_010926.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:169243-169947:- | gene-YER010C_CAT1 | rna-NM_001178901.3_CAT1 | cds-NP_010926.3_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:166633-167337:- | gene-YER010C_CBS1585 | rna-NM_001178901.3_CBS1585 | cds-NP_010926.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:167900-168604:- | gene-YER010C_CBS436 | rna-NM_001178901.3_CBS436 | cds-NP_010926.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:166527-167231:- | gene-YER010C_CBS6412 | rna-NM_001178901.3_CBS6412 | cds-NP_010926.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:171173-171877:- | gene-YER010C_CBS6413 | rna-NM_001178901.3_CBS6413 | cds-NP_010926.3_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:170460-171164:- | gene-YER010C_CENPK1137D | rna-NM_001178901.3_CENPK1137D | cds-NP_010926.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:166986-167690:- | gene-YER010C_EthanolRed | rna-NM_001178901.3_EthanolRed | cds-NP_010926.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:167246-167950:- | gene-YER010C_FaliES1 | rna-NM_001178901.3_FaliES1 | cds-NP_010926.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000024.1:34218-34922:- | gene-YER010C_JAY291 | rna-NM_001178901.3_JAY291 | cds-NP_010926.3_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:170545-171249:- | gene-YER010C_MUCL30387 | rna-NM_001178901.3_MUCL30387 | cds-NP_010926.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:167067-167771:- | gene-YER010C_MUCL30388 | rna-NM_001178901.3_MUCL30388 | cds-NP_010926.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:165671-166375:- | gene-YER010C_MUCL39482 | rna-NM_001178901.3_MUCL39482 | cds-NP_010926.3_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:171539-172243:- | gene-YER010C_MUCL42920 | rna-NM_001178901.3_MUCL42920 | cds-NP_010926.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:172633-173337:- | gene-YER010C_NCIM3186 | rna-NM_001178901.3_NCIM3186 | cds-NP_010926.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:170743-171447:- | gene-YER010C_NCYC1407 | rna-NM_001178901.3_NCYC1407 | cds-NP_010926.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:175045-175749:- | gene-YER010C_PE2H3 | rna-NM_001178901.3_PE2H3 | cds-NP_010926.3_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:170960-171664:- | gene-YER010C_PE2H4 | rna-NM_001178901.3_PE2H4 | cds-NP_010926.3_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:172634-173338:- | gene-YER010C_S288C | rna-NM_001178901.3_S288C | cds-NP_010926.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000020.1:70270-70974:+ | gene-YER010C_SA1 | rna-NM_001178901.3_SA1 | cds-NP_010926.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:167652-168356:- | gene-YER010C_ThermosaccDry | rna-NM_001178901.3_ThermosaccDry | cds-NP_010926.3_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:167136-167840:- | gene-YER010C_VR1 | rna-NM_001178901.3_VR1 | cds-NP_010926.3_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:165682-166386:- | gene-YER010C_ZTW1 | rna-NM_001178901.3_ZTW1 | cds-NP_010926.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:170401-171105:- | gene-YER010C_Sparadoxus | rna-NM_001178901.3_Sparadoxus | cds-NP_010926.3_Sparadoxus | 87.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |