Gene name: YEL1
Reference locus (S288C): YBL060W
Gene biotype: protein_coding
Description: Guanine nucleotide exchange factor specific for Arf3p; localized to the bud neck and tip; required for localization of Arf3p to the bud neck and tip
Top 10 interactors (score): ARF3 (0.986); ARL1 (0.942); GEA1 (0.916); AFI1 (0.9); SYT1 (0.896); GEA2 (0.857); GTS1 (0.766); SEC7 (0.749); LSB5 (0.748); YDR131C (0.715); ARF1 (0.705); CTR1 (0.699); HEL1 (0.692); YPT31 (0.69); ARF2 (0.643); ARL3 (0.632); YER135C (0.619); BIG1 (0.574); CDC42 (0.548); SAR1 (0.53)
Homologues (species, bitscore): CYTH3 (Homo sapiens, 51.6); Cyth3 (Mus musculus, 53.5); cyth1a (Danio rerio, 55.8); cyth4 (Xenopus tropicalis, 61.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:101513-103576:+ | gene-YBL060W_AKU4011 | rna-NM_001178300.1_AKU4011 | cds-NP_009493.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:92369-94432:+ | gene-YBL060W_BG1 | rna-NM_001178300.1_BG1 | cds-NP_009493.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:102127-104190:+ | gene-YBL060W_Bruggeman | rna-NM_001178300.1_Bruggeman | cds-NP_009493.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:104765-106828:+ | gene-YBL060W_CAT1 | rna-NM_001178300.1_CAT1 | cds-NP_009493.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:94080-96143:+ | gene-YBL060W_CBS1585 | rna-NM_001178300.1_CBS1585 | cds-NP_009493.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:102586-104649:+ | gene-YBL060W_CBS436 | rna-NM_001178300.1_CBS436 | cds-NP_009493.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:92586-94649:+ | gene-YBL060W_CBS6412 | rna-NM_001178300.1_CBS6412 | cds-NP_009493.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:99658-101721:+ | gene-YBL060W_CBS6413 | rna-NM_001178300.1_CBS6413 | cds-NP_009493.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:101693-103756:+ | gene-YBL060W_CENPK1137D | rna-NM_001178300.1_CENPK1137D | cds-NP_009493.1_CENPK1137D | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:115512-117575:+ | gene-YBL060W_EthanolRed | rna-NM_001178300.1_EthanolRed | cds-NP_009493.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:116365-118428:+ | gene-YBL060W_FaliES1 | rna-NM_001178300.1_FaliES1 | cds-NP_009493.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000072.1:18983-21046:+ | gene-YBL060W_JAY291 | rna-NM_001178300.1_JAY291 | cds-NP_009493.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:101502-103565:+ | gene-YBL060W_MUCL30387 | rna-NM_001178300.1_MUCL30387 | cds-NP_009493.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:102780-104843:+ | gene-YBL060W_MUCL30388 | rna-NM_001178300.1_MUCL30388 | cds-NP_009493.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:94261-96324:+ | gene-YBL060W_MUCL39482 | rna-NM_001178300.1_MUCL39482 | cds-NP_009493.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:101094-103157:+ | gene-YBL060W_MUCL42920 | rna-NM_001178300.1_MUCL42920 | cds-NP_009493.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:107729-109792:+ | gene-YBL060W_NCIM3186 | rna-NM_001178300.1_NCIM3186 | cds-NP_009493.1_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:95403-97466:+ | gene-YBL060W_NCYC1407 | rna-NM_001178300.1_NCYC1407 | cds-NP_009493.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:101659-103722:+ | gene-YBL060W_PE2H3 | rna-NM_001178300.1_PE2H3 | cds-NP_009493.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:99303-101366:+ | gene-YBL060W_PE2H4 | rna-NM_001178300.1_PE2H4 | cds-NP_009493.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:107932-109995:+ | gene-YBL060W_S288C | rna-NM_001178300.1_S288C | cds-NP_009493.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:92038-94101:+ | gene-YBL060W_SA1 | rna-NM_001178300.1_SA1 | cds-NP_009493.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:116326-118389:+ | gene-YBL060W_ThermosaccDry | rna-NM_001178300.1_ThermosaccDry | cds-NP_009493.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:98493-100556:+ | gene-YBL060W_VR1 | rna-NM_001178300.1_VR1 | cds-NP_009493.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:93042-95106:+ | gene-YBL060W_ZTW1 | rna-NM_001178300.1_ZTW1 | cds-NP_009493.1_ZTW1 | 99.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:127705-129765:+ | gene-YBL060W_Sparadoxus | rna-NM_001178300.1_Sparadoxus | cds-NP_009493.1_Sparadoxus | 87.7 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |